Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0433 ATGTGGGGTCAGGGAGTAAATGGGGATTTCAGGTTCACTGTTCAAAATGGGGACGAGTCTCAATGGACAGCGACACCATACCGTTATAAACATATGAGTAGCAGTGAGATGGATAAAACCCCAAAAGAGGAGTCCAAGACGCCTCCTCCCACATCTCAGGAGCAGTCTTCAACAACCGGTGCTGGAACAATTAATCCTGATTGGTCCAGCTTTCAGGCATATTCTCCTATGCCTCCACATGGCTTCTTGGCATCTAGTCCACAAGCCCATCCATATATGTGGGGTGTCCAGCATATTATGCCTCCCTATGGCACTCCACCACATCCCTATGTTGCAATGTATCCCCATGGTGGCATATATGCTCATCCATCCATGCCTCCGGGATCTTATCCTTTTAGTCCTTTTGCAATGCCTTCTAATGGTATTGTCGAGGCTTCAGGAAATACTCTTGGAAGCATGGAAGCAGGTGTTGTTAAGCCTCCTGAGGCAAAGGAAAAATTGCCAATCAAAAGATCAAAAGGAAGTTTGGGTAGTTTGAATATGATTACCGGGAAAAATAACGAACATAGTAAAACAACTGGGACATCTGCTAATGGAACACATTCAAAGAGTGGTGAGAGTGCAAGTGAAGGCACCAGTGAAGGAAGTGATGCTAATTCTCAGAATGACTCTCAATTGAAATCAGGGGGCAGACAAGATTCATATGAAGAAGAACCATCTCAGAATGGCAGTTCGGTGCATGCTTCTCAAAATGGGGGGCTTAATGCACCTCATACAGCAGTTAACCAAACCATGTCTACTGTACCTATTCCTGTTGGTGGTACTCCTGGAGCAGTTCCTGGTCCCACAACAAACTTAAATATAGGAATGGATTATTGGGGTTCACCAGCTTCAGCCAACATTCCTGAATTGCGTGGAAAGGTTCCATCTCCTGCAGTTGCTGGAGGGATGGTTACTGGTGGATCACGAGATAGTGTTCAGTCTCAACGTTGGCTGCAGGATGAAAGAGAGCTTAAAAGACAAAGACGGAAGCAGTCTAACAGAGAATCTGCTCGTAGGTCCAGGTTGCGCAAACAGGCTGAGTGTGATGAACTAGCTCAGCGAGCCGAGGCTTTGAAAGAAGAAAATGCTTCTCTTCGGTCAGAAGTAAGTCGAATCAGGCGCAAGTACGAGCAGCTACTCTCTGAAAATGCCGTGCTTAAGGAGAGACTCGGGGAACCTGGTAACGATGATCCCAGGTCGGGAAGGAACGATCAGAATGTGGACAATGACGCTCAACAGAGTGGGCAAACTAAGGCTGTGTAG 1305 0.4659 MWGQGVNGDFRFTVQNGDESQWTATPYRYKHMSSSEMDKTPKEESKTPPPTSQEQSSTTGAGTINPDWSSFQAYSPMPPHGFLASSPQAHPYMWGVQHIMPPYGTPPHPYVAMYPHGGIYAHPSMPPGSYPFSPFAMPSNGIVEASGNTLGSMEAGVVKPPEAKEKLPIKRSKGSLGSLNMITGKNNEHSKTTGTSANGTHSKSGESASEGTSEGSDANSQNDSQLKSGGRQDSYEEEPSQNGSSVHASQNGGLNAPHTAVNQTMSTVPIPVGGTPGAVPGPTTNLNIGMDYWGSPASANIPELRGKVPSPAVAGGMVTGGSRDSVQSQRWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENASLRSEVSRIRRKYEQLLSENAVLKERLGEPGNDDPRSGRNDQNVDNDAQQSGQTKAV 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0433 434 Pfam Disordered region downstream of MFMR 165 302 - -
Lal16g0433 434 Pfam bZIP transcription factor 335 397 IPR004827 GO:0003700|GO:0006355
Lal16g0433 434 Coils Coil 355 403 - -
Lal16g0433 434 MobiDBLite consensus disorder prediction 403 418 - -
Lal16g0433 434 MobiDBLite consensus disorder prediction 419 434 - -
Lal16g0433 434 Pfam G-box binding protein MFMR 32 126 IPR012900 -
Lal16g0433 434 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 337 400 IPR004827 GO:0003700|GO:0006355
Lal16g0433 434 SUPERFAMILY Leucine zipper domain 338 394 IPR046347 GO:0003700|GO:0006355
Lal16g0433 434 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 342 357 IPR004827 GO:0003700|GO:0006355
Lal16g0433 434 MobiDBLite consensus disorder prediction 158 361 - -
Lal16g0433 434 MobiDBLite consensus disorder prediction 396 434 - -
Lal16g0433 434 MobiDBLite consensus disorder prediction 329 344 - -
Lal16g0433 434 CDD bZIP_plant_GBF1 340 390 IPR045314 GO:0003700|GO:0006355
Lal16g0433 434 Gene3D - 338 394 - -
Lal16g0433 434 PANTHER G-BOX-BINDING FACTOR 3-RELATED 32 434 IPR044827 GO:0003700|GO:0006355|GO:0043565
Lal16g0433 434 MobiDBLite consensus disorder prediction 23 70 - -
Lal16g0433 434 MobiDBLite consensus disorder prediction 46 70 - -
Lal16g0433 434 MobiDBLite consensus disorder prediction 176 270 - -
Lal16g0433 434 SMART brlzneu 335 399 IPR004827 GO:0003700|GO:0006355
Lal16g0433 434 PANTHER BZIP TRANSCRIPTION FACTOR FAMILY PROTEIN 32 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0433 Lal-Chr16 2626263 2634597 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0433 32 404 bZIP Transcription Factor Family AT2G35530 63.874 5.22e-158 451
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal16g0433 MFMR_assoc 2.4e-58 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0433 K09060 - gmx:778122 645.966
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0433 16 2626263 2634597 Lal16g0433 16 2626263 2634597 ECH
Lal16g0433 16 2626263 2634597 Lal15g0376 15 2530936 2538597 LSH
Lal16g0433 16 2626263 2634597 Lal23g1134 23 12854400 12863399 LSH