Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0429 ATGACAGATAGCACAGTATCCTTTTTACTTGACAAGTTGACTTCATTGCTGCAAGAAGAAGTGAATCTGCAGAGAGGGGTGAGTCAAGAGGTTCAGTTCATCAAAGATGAACTGGAACGCCATAAGGCTATCTTAAGGGTGGCTGAAGTTCTAGAAGACAAAGACCCTGAACTCAAAGTATGGCTCAAACGTGTGAGAGATATTGCCCATGATATGGAAGATGCAATAGATGAATTCAATCTTCGCCTTGTTGATCACCACGGACAAAGCAATATCTCTCTTCTTCTTCATAAGCTTGCTAACATTAGAGCTCGACACAGGATTGCTTCAGATATACAACGGATCAAAGCTAGAGTGGAATTAATCTCTAAGGACCGTCCCAACTTATATGGGATAGGCTCAAGCTCGAGTCAATGGTTGTCACCGAGGCATGGCATGCAGGGAGATGCTCTTCTGCTAGAGGAAGCTGATCTAGTTGGTATTGATACACGTAAAAACCAGGTGAGTGATTTACTTTTCAAAGATGAAACAGGTAGGAGAGTAATTCCTATTTATGGAATGGGAGGGTTAGGGAAAACTACCCTGGCAAAGCAAGTTTATGAGGACCCAAAAGTGAAGAAGCGTTTCAGGTTTCATGCTTGGGTTAATGTTACTCAATCTTTCAAGACGCAAGAGCTCCTGAAAGACCTGGTTCAACAGCTCTATAATGTCAAAGGCAAGCCAGCACCTGAAGATGTTGGACAAATGAAAATTGACACGCTAAAAGAGGAGATCAAGAACTTGCTCAGAAGAAGCAGGTACCTCATTGTGCTGGATGATGTGTGGCAAGTAAATCTCTGGAATGCTGTCAGATATGCTTTGCCTAATAACAACCTTGGCAGTAGAGTAATGCTCACCACCCGCAAGAAAGATGTGGCCTCACATTCCTCCGCGGAGTCGGGTAAGGTCTATAACCTTGAATTCTTATCTGAGCAAGAAGCTTGGTCTCTTTTCTGCAAGAAGACATTTCAGGGTGACTCTTGCCCTCCTCATCTGGAAGAAGTTTGCCGAAGTATCTTAAAAATGTGCCAGGGGTTGCCACTAGCAATCGTGGCAATCAGTGGTGCTTTGGCTACAAAAGACAGGACAGACATAGAAGAATGGCAGATGGTTTATAGAAGTTTTGGGTCTGAAATTGAAGGTAATGACCTACTTGAGGGTATGAAGAGAGTGCTTTCACTTAGTCTGAATGAGTTGCCTTACTATCTTAAATCCTGTTTGCTGTACATAAGCATCTTCCCAGGATTCTATGCTGTTGAGCATATGAGATTGATTCGCTTGTGGGTAGCTGAAGGATTTGTCCACGGAGAAAATGGAAAGACAGCAGAGGAAGTAGCAGACAGTTACCTCAAGGAGCTCTTGGACAGAAGTCTGCTGCAAGTGGTGGAGAAAACCACTGATGGCAGGATGCAGACTTGTCGCATGCACGACCTTCTAAGGGAGATTGTCAATTTGAAGTCAAAGGATCAGAACTTTGCAACAACAGCCAAAGAACAAGACATAATCTGGCCAGACAGAGTTCGACGCCTATCAGTAATAAACACAATACACAACATACCGCAAAATAAGACCACATTTAATCTTCGGTCTCTGCTAATGTTTGCCTTATCAGATCCACTCGATCATTTTTCCATGCGTGCATTATGTCCAACTACTGGTTATAGGTTGCTTAGGGTGTTAGATTTGCAGGATGCACCTTTGGAGGTTTTTCCTTCTGAAATTGTCAACCTTTACCTTCTGAAGTATCTAAGTTTGAAGAATACAAAGGTGAAAAACATTCCAGGGTCGATTAAGAAGCTTCGGTACCTGCAGACATTAGATCTTAAACATTCCTATGTCACTGAATTGCCAGTTGAAATTGTGGAGCTGCACAGGCTATGCCATCTCCTGGTGTATCGATTTGAGATTAAATCCTATGCTCATTTCCACTCAAGGTATGGCTTCAGGATAGCTGCCTCTATAGGAAAAATGCAATCTTTGCAAAATCTGTGTTCTATAGAGGCAGATCAAGGAAGTAATGCCTTGATGGTTGATCTAGGAAAACTTAATCAACTTAAGAGGCTGGGTATAAGAAAGATGAGGCAAGAAGACGGTGCTGCTTTATGTTCATCCATCGAGAAGATGATCAATCTCCGATCACTGTCCATAACTGCAATTGGAGAAGATGAGATAATTGACATTCAAAACATTTCCAAGCCTCCTCTGTATCTTCAGAGATTATACTTGAGTGGACGTCTGGAGAAGTTTCCCACATGGGTAAGTTCTCTCACAAATTTGGCAAGAGTGTATCTAAAATGGAGCAGGTTAAAGGAGGATCCTCTGGTGTATCTTCAAGATTTGCCAAATCTAAGGCATCTTGAGTTTCTTCAGGTTTATGTTGGAGCCACATTGCATTTCAAGGCTAAGGGATTTCCAAGTTTGAAGGTGTTAGGCCTTGATGATTTAGATGGACTGAAAACTATGGTTATTGAGGAGGGAGCAATGTGTGGTCTAAAGAAGCTGATAATCCAGCGCTGTAATTCATTCAAGGAGGTACCGTTAGGAATTGAACACCTAACAAAACTAAAGAAAATTGAGTTTTTTGATATGCCTGATGAATTGATTACAGCACTGCGTCCAGATGAAGACAAAGATTATTGGAGAGTACAAAATGTGCCAGCAGTTTATGCCAAATATTGGAGGGATGATGGATGGGATGTCTACACATTAGAGACTTTTGGTGAGAGAGAGACTGATTTCAGTCATAGTGCTGCAATTAGAAGCCATGAACTTCACACTCTCTGGAAGGTTTAA 2832 0.4198 MTDSTVSFLLDKLTSLLQEEVNLQRGVSQEVQFIKDELERHKAILRVAEVLEDKDPELKVWLKRVRDIAHDMEDAIDEFNLRLVDHHGQSNISLLLHKLANIRARHRIASDIQRIKARVELISKDRPNLYGIGSSSSQWLSPRHGMQGDALLLEEADLVGIDTRKNQVSDLLFKDETGRRVIPIYGMGGLGKTTLAKQVYEDPKVKKRFRFHAWVNVTQSFKTQELLKDLVQQLYNVKGKPAPEDVGQMKIDTLKEEIKNLLRRSRYLIVLDDVWQVNLWNAVRYALPNNNLGSRVMLTTRKKDVASHSSAESGKVYNLEFLSEQEAWSLFCKKTFQGDSCPPHLEEVCRSILKMCQGLPLAIVAISGALATKDRTDIEEWQMVYRSFGSEIEGNDLLEGMKRVLSLSLNELPYYLKSCLLYISIFPGFYAVEHMRLIRLWVAEGFVHGENGKTAEEVADSYLKELLDRSLLQVVEKTTDGRMQTCRMHDLLREIVNLKSKDQNFATTAKEQDIIWPDRVRRLSVINTIHNIPQNKTTFNLRSLLMFALSDPLDHFSMRALCPTTGYRLLRVLDLQDAPLEVFPSEIVNLYLLKYLSLKNTKVKNIPGSIKKLRYLQTLDLKHSYVTELPVEIVELHRLCHLLVYRFEIKSYAHFHSRYGFRIAASIGKMQSLQNLCSIEADQGSNALMVDLGKLNQLKRLGIRKMRQEDGAALCSSIEKMINLRSLSITAIGEDEIIDIQNISKPPLYLQRLYLSGRLEKFPTWVSSLTNLARVYLKWSRLKEDPLVYLQDLPNLRHLEFLQVYVGATLHFKAKGFPSLKVLGLDDLDGLKTMVIEEGAMCGLKKLIIQRCNSFKEVPLGIEHLTKLKKIEFFDMPDELITALRPDEDKDYWRVQNVPAVYAKYWRDDGWDVYTLETFGERETDFSHSAAIRSHELHTLWKV 943
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0429 943 Gene3D - 5 109 - -
Lal16g0429 943 PANTHER DISEASE RESISTANCE PROTEIN RP 152 904 IPR044974 GO:0006952
Lal16g0429 943 PANTHER DISEASE RESISTANCE PROTEIN RP 1 139 IPR044974 GO:0006952
Lal16g0429 943 Pfam NB-ARC domain 163 409 IPR002182 GO:0043531
Lal16g0429 943 PANTHER OS08G0539900 PROTEIN 152 904 - -
Lal16g0429 943 PANTHER OS08G0539900 PROTEIN 1 139 - -
Lal16g0429 943 Pfam Rx N-terminal domain 6 87 IPR041118 -
Lal16g0429 943 Gene3D - 146 317 IPR027417 -
Lal16g0429 943 Gene3D - 321 408 IPR042197 -
Lal16g0429 943 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 423 IPR027417 -
Lal16g0429 943 Gene3D - 409 499 IPR036388 -
Lal16g0429 943 SUPERFAMILY L domain-like 487 878 - -
Lal16g0429 943 PRINTS Disease resistance protein signature 181 196 - -
Lal16g0429 943 PRINTS Disease resistance protein signature 261 275 - -
Lal16g0429 943 PRINTS Disease resistance protein signature 356 370 - -
Lal16g0429 943 PRINTS Disease resistance protein signature 611 627 - -
Lal16g0429 943 Gene3D Ribonuclease Inhibitor 553 885 IPR032675 -
Lal16g0429 943 CDD RX-CC_like 3 124 IPR038005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0429 Lal-Chr16 2596815 2599646 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0429 159 624 WRKY Transcription Factor Family AT5G45050 21.499 2.52e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0429 K13457 - gmx:100305458 1433.31