Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0424 ATGGAGGCTTCATGGGAAGAAAGTGTGACCTATTCTATCAACACAATCTACCTTCTCTTCTCTGCATACCTCGTCTTTGTAATGCAGATTGGCTTTGCCATGATATGTGCAGGCTCTGTACGTGCCAAAAATGCCATGAACATAATGCTCACCAACGTTGTTGATGCTGTTGTGGGTAGCATCTCCTTCTACCTTTTCGGCTTTGCATTTGCTTATGGCAATTCTAACCCTTTCATTGGTACAGATTTGTTTGCTCTACTTAACATCCCAAATATCACTTACGACTATGCATTCTTCCTTTACCAATGGGCTTTTGCTATAGCCGTTGCAGGCATCACAAGTGGGTCTATAGCTGAGAGAACCCAATTCAGTGCCTATCTTGTTTTCTCATTTTTCCTTAGTGGTTTTGTGTACCCAATTGCAGCCCATTGGGTTTGGGCTCCTAGTGGTTGGCTCAGTCCATTTTCCACTAACTTGTTCTTGAGCTCAGGTGCCATTGACTTTGCAGGGAGTGGAGTTGTCCACTTGGTTGGTGCAATTGCAGGCTTATGGGGTTCTATCATTGAAGGCCCACGGGCCGGAAGATTCGATGCCTTTGGAAAGCCTGTCCCTCTTCGAGGCCACAATGCAACACTTGTAGTTCTTGGAACATTTTTATTATGGTTTGGTTGGTTTGGGTTTAATCCGGGCTCATTTGATAAGATTGTAGTGTCTTATCCAGGCACAACATATCAAGGTAATTGGACTTCAATAGGTAGAACTGCTGTGGTAACAACATTAGCAGGCTCTACTGCTGGGCTTGTTACATTGTTTGGTCGAAGATTATTAATAGGACATTGGGATGCTATGGATGTTTGTAATGGCTTGCTTGGTGGGTTAGTTGCTATAACTTCTGGTTGTTCTGTTGTTGAACCATGGGCTGGTATTCTTTGTGGGTTTGTTGCTGCTTGGGTTTTGATTGGGCTCAATATAGTGGCACTTAAAATGAACTATGATGACCCATTAGAGGCTGCACAATTGCATGGTGGGTGTGGCACTTGGGGTTTGTTGTTTACAGGGTTGTTTGCTAAACAAGAGTTTGTAATTCAAACCTATAATTCAGGTGAGGTAGGTGTATCAAGGCCTTATGGGCTACTACTTGGAGGTGGATGGAGTTTGATTGGAGCTCAAGTTGTTGAGATTTTGGTAATATTTGTTTGGGTTAGTGTAACAATGGGGCCTATGTTTTATGGGTTGCATAAGCTGAATATACTTAGAATTTCTATAGATGATGAAGTTGCAGGCCTTGATATCTCAAGACATGGAGGATATGCATATGTTCATGAAGAACATAATTTTCCTCAATCTTATGCAGATTACATGCGTATCCGGGAAGACCAATCATAA 1386 0.4235 MEASWEESVTYSINTIYLLFSAYLVFVMQIGFAMICAGSVRAKNAMNIMLTNVVDAVVGSISFYLFGFAFAYGNSNPFIGTDLFALLNIPNITYDYAFFLYQWAFAIAVAGITSGSIAERTQFSAYLVFSFFLSGFVYPIAAHWVWAPSGWLSPFSTNLFLSSGAIDFAGSGVVHLVGAIAGLWGSIIEGPRAGRFDAFGKPVPLRGHNATLVVLGTFLLWFGWFGFNPGSFDKIVVSYPGTTYQGNWTSIGRTAVVTTLAGSTAGLVTLFGRRLLIGHWDAMDVCNGLLGGLVAITSGCSVVEPWAGILCGFVAAWVLIGLNIVALKMNYDDPLEAAQLHGGCGTWGLLFTGLFAKQEFVIQTYNSGEVGVSRPYGLLLGGGWSLIGAQVVEILVIFVWVSVTMGPMFYGLHKLNILRISIDDEVAGLDISRHGGYAYVHEEHNFPQSYADYMRIREDQS 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0424 461 PANTHER AMMONIUM TRANSPORTER 1 MEMBER 3 1 458 - -
Lal16g0424 461 Pfam Ammonium Transporter Family 18 439 IPR024041 GO:0008519|GO:0016020|GO:0072488
Lal16g0424 461 SUPERFAMILY Ammonium transporter 11 420 - -
Lal16g0424 461 PANTHER AMMONIUM TRANSPORTER 1 458 - -
Lal16g0424 461 TIGRFAM amt: ammonium transporter 14 439 IPR001905 GO:0008519|GO:0016020|GO:0072488
Lal16g0424 461 ProSitePatterns Ammonium transporters signature. 167 192 IPR018047 GO:0008519|GO:0016020|GO:0072488
Lal16g0424 461 Gene3D Ammonium transporter AmtB like domains 2 455 IPR029020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0424 Lal-Chr16 2568948 2570333 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0424 8 457 Inorganic Solute Cotransporters AT4G13510 63.135 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0424 K03320 - jre:109009016 779.245