Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0415 ATGGCTTTTTCTTCAAGCTCTCTCTTGAGGATGGATGAGATAGCAGGCAAAGGAAAGGGCCTTGTTGCAGCACAATCACTCAAAGCTGGACAAGTAGTACTAAGAGAATCTCCACTCATTATCTACTCTTCTTCTCCACTCATTTCTACATCTTCCTCCCCTTCTTCTCACTTCCCTTATTGTGATCACTGCTTCAGAACCCTACCAACAAATTCTATTCCATGCCCTTCTTGCTCTTACCACCATTTCTGCAGCTATAAGTGCTTCTCCACAGCCCTTAATACCTTTCACTCTTCCTTAGTATGCCAAGCACTTACCCATTCAAGAGACACTGAATCACTTCAACAACAACCCTCTGAACGCCAAGTCCAAGCTCGTTTTGTTGTTGCAGCCTATAACCTTGCCATTATATCACCTTCTGGTATTCACGCTTTCCTTTCTCTTCATGGTACACCAGATGATTCTATTATTGAAGCTGCTAAGTTCTTGCATTCTCTAATCTCACCCCTTTTCCCATCCAATATCAACATTTCTGTTGATCTCACTGCCAAACTTCTAGCCAAAGATAGAATCAACTCTTTTTGCTTGATGAACCCTTATTCCCCAGATGGTCCTCAAAGATCTATAAAAGCATATGCTATTTACCCAAAAGCCAGCATGTTCAACCATGATTGCATTCCCAATGCATGCAGGTTTGATTATGTGGACACTACAGATCTTGATGATGAACACAATAACACTGACATTGTTATTAGGATGATAGAAGATGTTGCTGAAGGAAGAGAGATTGAAGCAAATTGGGCTCAAGATTGCCAAAACTATGTAGAAGAATACAGTGATCTGGCACATGTGCGTTTCATTACCAAGTATGTTTGTCACAGAAAAAACTGTAATGGCACCCTGGCTCCTAAAGATGATGTACACACAAATGTTTTGGAGTGCAACTTCTGTGGTAATTTAAAAAGTGACACTGCTTAA 978 0.407 MAFSSSSLLRMDEIAGKGKGLVAAQSLKAGQVVLRESPLIIYSSSPLISTSSSPSSHFPYCDHCFRTLPTNSIPCPSCSYHHFCSYKCFSTALNTFHSSLVCQALTHSRDTESLQQQPSERQVQARFVVAAYNLAIISPSGIHAFLSLHGTPDDSIIEAAKFLHSLISPLFPSNINISVDLTAKLLAKDRINSFCLMNPYSPDGPQRSIKAYAIYPKASMFNHDCIPNACRFDYVDTTDLDDEHNNTDIVIRMIEDVAEGREIEANWAQDCQNYVEEYSDLAHVRFITKYVCHRKNCNGTLAPKDDVHTNVLECNFCGNLKSDTA 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0415 325 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 263 325 - -
Lal16g0415 325 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 3 268 - -
Lal16g0415 325 SUPERFAMILY SET domain 7 267 IPR046341 -
Lal16g0415 325 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 3 268 IPR044238 -
Lal16g0415 325 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ASHR2 263 325 IPR044238 -
Lal16g0415 325 ProSiteProfiles SET domain profile. 1 268 IPR001214 GO:0005515
Lal16g0415 325 SMART set_7 7 274 IPR001214 GO:0005515
Lal16g0415 325 Pfam SET domain 18 263 IPR001214 GO:0005515
Lal16g0415 325 Gene3D - 116 193 - -
Lal16g0415 325 Gene3D - 60 115 - -
Lal16g0415 325 Gene3D SET domain 20 269 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0415 Lal-Chr16 2515471 2516699 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lal16g0415 SET 2.1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0415 - - lang:109349046 565.459