Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0399 ATGAGCATTTGTCTGATGAATTGGCAATGGTCATGGCTTCTTTATGTTCTGCTGATACATATTGTCATCAATAAAAGCCTAGCGATCAGCCCGGATGGTGAGGTGCTTATCAGCTTCAGGACAGCAGTTGTTAGCTCAGATGGTGTCCTGGTACAATGGAGACCTGAGGATCCTGACCCATGTAAATGGAAAGGAGTGAAATGTGATCCCAAAACCAAGAGTGTAACACATCTGAGTCTGTCTCATCATAAGTTGAGTGGGCCTTTATCACCTGACCTTGGGAAGCTAGAGCATCTGAGGGTTCTCGCTCTGCACGATAACAACTTATATGGGACAATTCCACCAGCATTGGGAAACTGCACTGATTTGCAGGAAATATTCTTACAAGGTAATTACCTTAGTGGAACGATCCCGGGTGAAATAGGAAACCTTTCACAGCTACAGAATTTGGATATATCAAGCAACTCCCTCAGTGGGACTATTCCGGCATCACTTGGGAAGTTGTCTAATCTAAAAAATTTCAATGTATCAGCCAATTTTCTGGCCGGAACAATACCTTCTGATGGTGTCCTTGCCAACTTCACTGCAAGTTCCTTTGCTGGAAACCGTGGTTTGTGTGGAATGCAAATCAATTCAATATGTAAAGGTTCTCCTGATGCAAATAGCCCATCTAACTCGGATCAAAATGAAAATGGAAGGAAGAAATATTCTGGCCGGCTGCTCATCAGTGCATCAGCAACTGTGGGTGCACTACTTTTGGTAGCACTTATGTGCTTCTGGGGTTGTTTTCTTTATAAGAAGTTTGGTAAAAACGACAGAATAAGCCTGGCAATGGGTGTCAGTGGAGGTGCATCAATTGTGGTGTTTCATGGAGACCTGCCTTACTCATCGAAAGAAATTATTAAGAAACTAGAGACTTTGAATGAGGAACACATAATAGGGATAGGGGGATTTGGAACCGTTTACAAGCTTGCAATGGACGATGGGAGTGTATTTGCTTTGAAAAAGATTGTAAAGTTGAATGAGGGCTTTGATCGTTTCTTTGAGAGGGAACTTGAAATTCTTGGTAGCATCAAACACCGTTATCTGGTGAACTTACGAGGATATTGCAATTCACCTACATCAAAGTTGTTGATATATGACTACCTACCTGGCGGCAATCTTGACGAAGCTCTTCATGAAAGATCTGAGCCACTAGACTGGGATTCACGCTTGAATATAATACTGGGAGCTGCAAAAGGGCTTGCCTACTTGCACCATGATTGTTCCCCTAGGATCATACACCGAGACATAAAATCAAGCAACATTTTGCTTGATGGAAACCTGGATGCCCGAGTCTCTGATTTTGGACTTGCTAAACTTCTGGAGGATGAAGAAACTCATATCACAACTATTGTTGCCGGAACATTCGGTTATCTTGCTCCAGAGTATATGCAAAGTGGCAGAGCCACTGAGAAGACTGACATCTATAGTTTTGGTGTGCTGACACTTGAAGTAATTAGTGGAAAGCGGCCAACAGATGCATCCTTCATTGAAAAGGGTCTCAATATTGTTGGTTGGTTGAATTTTCTCATTACGGAAAATAGGCCAAGGGAAATTGTTGATTCACTATGTCAGGGGGTGCAGACGGAGAGCCTTGATGCCTTACTCTCTGTGGCTATTCAATGTGTTTCCTCAAATCCAGAGGATCGACCAACCATGCACCGAGTGGTCCAGTTGTTTGAATCAGAGGTCGTAACCCCATGCCCAAGTGACTTCTATGACTCCAACTCCGACTAA 1779 0.4317 MSICLMNWQWSWLLYVLLIHIVINKSLAISPDGEVLISFRTAVVSSDGVLVQWRPEDPDPCKWKGVKCDPKTKSVTHLSLSHHKLSGPLSPDLGKLEHLRVLALHDNNLYGTIPPALGNCTDLQEIFLQGNYLSGTIPGEIGNLSQLQNLDISSNSLSGTIPASLGKLSNLKNFNVSANFLAGTIPSDGVLANFTASSFAGNRGLCGMQINSICKGSPDANSPSNSDQNENGRKKYSGRLLISASATVGALLLVALMCFWGCFLYKKFGKNDRISLAMGVSGGASIVVFHGDLPYSSKEIIKKLETLNEEHIIGIGGFGTVYKLAMDDGSVFALKKIVKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDYLPGGNLDEALHERSEPLDWDSRLNIILGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLDARVSDFGLAKLLEDEETHITTIVAGTFGYLAPEYMQSGRATEKTDIYSFGVLTLEVISGKRPTDASFIEKGLNIVGWLNFLITENRPREIVDSLCQGVQTESLDALLSVAIQCVSSNPEDRPTMHRVVQLFESEVVTPCPSDFYDSNSD 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0399 592 Gene3D Transferase(Phosphotransferase) domain 1 383 580 - -
Lal16g0399 592 SUPERFAMILY L domain-like 30 195 - -
Lal16g0399 592 ProSitePatterns Serine/Threonine protein kinases active-site signature. 426 438 IPR008271 GO:0004672|GO:0006468
Lal16g0399 592 Gene3D Ribonuclease Inhibitor 30 216 IPR032675 -
Lal16g0399 592 PANTHER RECEPTOR-LIKE PROTEIN 55 3 592 - -
Lal16g0399 592 ProSiteProfiles Protein kinase domain profile. 307 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g0399 592 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
Lal16g0399 592 Pfam Protein kinase domain 309 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g0399 592 SUPERFAMILY Protein kinase-like (PK-like) 291 574 IPR011009 -
Lal16g0399 592 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE FEI 1 3 592 IPR031071 GO:0004672|GO:0005524|GO:0030244
Lal16g0399 592 SMART serkin_6 307 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g0399 592 Gene3D Phosphorylase Kinase; domain 1 282 382 - -
Lal16g0399 592 ProSitePatterns Protein kinases ATP-binding region signature. 313 335 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0399 Lal-Chr16 2406530 2416462 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0399 1 583 Receptor kinase-like Gene Family AT2G35620 74.144 0.0 870
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Lal16g0399 Pkinase 5.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0399 - - gmx:100819230 1059.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0399 16 2406530 2416462 Lal15g0342 15 2306526 2323513 LSH