Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0397 ATGAAGGAGCCAACGTCAAAATTAAAACAATGGAAGCCATTCACAGCAAATTGTTGTTCAAGTGAGGACCAAATAATCTTTACAAACATCAGCAAGTGCAAAACCTCACGTTCTGATTTCTCTAACAACATTGCCCCTTTATCATCATTCAAGAAGCTCTCCGTCTCTGACCTTAGCGGTTCGTCTTCTATACGAATCAATGAGGATCTTCCACAGTCTTTTGGTCCTGATTTATATGATTTTCAGCTTAGTGAACTGCGTGCGATAACACAGAATTTTTCAAGCAGTTTCTTGCTTGGTGAAGGTGGATTTGGAACAGTGCATAAGGGTTATATTGATGATAAGTTGAGGCAGGGTTTGAAGGCTCAACATGTTGCTGTTAAGCTTCTTAACATTGAAGGATTACAAGGACACCGTGAATGGCTTGCAGAAGTGATATTACTTGGGCAGCTAAGACACCCCAACTTGGTTAAGTTGATTGGTTATTGTTGTGAGGATGAAGAAAGGGTACTTGTCTACGAATTCATGCCAAGAGGAAGTTTGGAGAATCACTTGTTCAAAGGACTAACATCACTACCATGGGAAACAAGATTAAGAATTGCACTAGATGCTGCTAAAGGCCTTTCCTTCTTGCATGGAACTAAGAAACCAGTCATTTACAGAGACTTCAAGACTTCCAATGTTTTGCTTGATTCAGACTTCAAAGCACATTTGTCAGATTTTGGACTAGCAAAAATGTGGCCTGAGGGATCAAAATCACGTGTTACAACCAGAGTTATAGGAACCGATGGATATGCAGCACCAGAATACATCTCAACAGGGCACTTGACAACAAAAAGTGATGTGTATAGCTTTGGGGTAGTCCTGCTAGAACTACTAACTGGAAGGAGATCTATGGAAAAGACAAGACTGAAGGCTGAACAAAACCTTGTGGATTGGTCAAAACCATACTTGTGTAGCAGTAAGAGGTTGAGGTACATTATGGATCCAAGGCTTGCAGGCCAATATTCTGTCAAAGGTTCAAAGGAAATGGCCCTTTTGGCATTGCAATGCATAAGTTTGAATCCTAAAGACAGGCCAAGAATGCCAACTATTGTTGAAACCCTGGAAACCATTCAACAGTGGATGTCAATGCGTACCCGCACCCATGGGTATCCTCAGGTAATACCCGTAACAGGTCGGGTTGGAGTTCGTGTTTTTGGATCCCCGGAATCCCCTGAAGAAATGGCCTTCAATAACAAATCCAAGAAATCTAGTTCACCTTCTCATATTAAACTCTACATCACCCTCTTTTTCATACTCCTCTTCACCCTACCAGCTCTTTTCCTTCTCCACACCCCCACCACCAATTCCATATGCATCAACCTTTCCAACAAACCATGGGCTGGTGATCTTAGATTAGCCGAGTTTGCATGGAACCGCCTCTCGTTTTTCGAAGACAGCCCTCCACCTATATCTCTCAAAATTGCTGTCTTCTCTAGAAAATGGCCTATTGGCACCACACCTGGCGGCATGGAGCGCCATGCTCACACCCTTCACACTGCTTTAGTGCGGCGTGGCCACCAAGTTCATGTCTTCACCTCTCCACCACAGGATGAAAGCAATTCAGCCTTAGCTTCAGAGACAAGTAATCATCAAGCAGGTGCACCCTCTTCACCTTACATCCATTGGCATGAAGGAGAGCCTGGCAAGTGGCGCTACAACAAAGCGTGGGAACAATTTCAAGAAGAAAACCAAAGAGAACCCTTTGATGTTGTTCACTCAGAAAGCGTAGCACTTCCACATGGGCTCGCTCGCAAAATTCCAAACCTTGCAGTGTCTTGGCATGGCATAGCCTTTGAAAGCTTGCAATCAAGTATTTTCCAGGACTTGGCTCGCGGGCCTGATGAGCCTCTATCACCCGATTTCAACAAAAGCTTACACGGGGTTATCCCTAAGGTGTTGAATGAGATAAGGTTCTTCAGGAACTATAAACACCATGTTGCTATAAGTGATAGTTGTGGTGAGATGCTAAGGGATGTGTACCAAATTCCAAGTAAAAGAGTCCATGTTATTATCAATGGTGTAGATGAAGATGACTTCAGAGAAGATGTAAAATTGGGAAAAGAATTTAGAACCAAAATTGGCGTTCCAAGCAATGCAAGTTTAGTTCTTGGTGTAGCTGGAAGATTGGTGAAGGATAAAGGCCATCCTTTGCTTCATGAAGCATTCTCTAGGCTTATAACCAAGCACCCGAATGTGTACTTGATTATAGCTGGCTCTGGACCATGGGAGAACCGGTACAAGGATTTAGGGAGCCAAGTTCTTGCTCTTGGTTCTATGAATCCTTCAATGTTAAGAGCATTTTATAATGCCATTGACATATTTGTTAATCCAACTCTCAGACCACAAGGGCTTGATCTTACTCTAATGGAGGCAATGATGAGTGGGAAGCCCCTTTTGGCATCAAGATTCCCAAGCATCAAAGGTTCTATTGTGGTTAATGATGAATTTGGCTTTATGTTCTCTCCCAATGTCCATTCCTTATTGGAGGCACTCGAAGCAGTGGTAAATGAAGGGCAAGAGAGGCTTGCAAGTAGGGGACAAGCATGTCGCGAATATGCAAATTCCATGTTTACAGCAAGAAAGATGGCATTAGCATATGAGAGGTTATTTCTATGCATAAAAAAAGATACATTTTGTAACTATCCTTGA 2694 0.4276 MKEPTSKLKQWKPFTANCCSSEDQIIFTNISKCKTSRSDFSNNIAPLSSFKKLSVSDLSGSSSIRINEDLPQSFGPDLYDFQLSELRAITQNFSSSFLLGEGGFGTVHKGYIDDKLRQGLKAQHVAVKLLNIEGLQGHREWLAEVILLGQLRHPNLVKLIGYCCEDEERVLVYEFMPRGSLENHLFKGLTSLPWETRLRIALDAAKGLSFLHGTKKPVIYRDFKTSNVLLDSDFKAHLSDFGLAKMWPEGSKSRVTTRVIGTDGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRSMEKTRLKAEQNLVDWSKPYLCSSKRLRYIMDPRLAGQYSVKGSKEMALLALQCISLNPKDRPRMPTIVETLETIQQWMSMRTRTHGYPQVIPVTGRVGVRVFGSPESPEEMAFNNKSKKSSSPSHIKLYITLFFILLFTLPALFLLHTPTTNSICINLSNKPWAGDLRLAEFAWNRLSFFEDSPPPISLKIAVFSRKWPIGTTPGGMERHAHTLHTALVRRGHQVHVFTSPPQDESNSALASETSNHQAGAPSSPYIHWHEGEPGKWRYNKAWEQFQEENQREPFDVVHSESVALPHGLARKIPNLAVSWHGIAFESLQSSIFQDLARGPDEPLSPDFNKSLHGVIPKVLNEIRFFRNYKHHVAISDSCGEMLRDVYQIPSKRVHVIINGVDEDDFREDVKLGKEFRTKIGVPSNASLVLGVAGRLVKDKGHPLLHEAFSRLITKHPNVYLIIAGSGPWENRYKDLGSQVLALGSMNPSMLRAFYNAIDIFVNPTLRPQGLDLTLMEAMMSGKPLLASRFPSIKGSIVVNDEFGFMFSPNVHSLLEALEAVVNEGQERLASRGQACREYANSMFTARKMALAYERLFLCIKKDTFCNYP 897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0397 897 CDD GT4_PimA-like 488 885 - -
Lal16g0397 897 Gene3D Glycogen Phosphorylase B; 699 869 - -
Lal16g0397 897 Gene3D Phosphorylase Kinase; domain 1 57 175 - -
Lal16g0397 897 PANTHER GLYCOSYLTRANSFERASE 409 897 - -
Lal16g0397 897 Pfam Glycosyl transferases group 1 716 858 IPR001296 GO:0016757
Lal16g0397 897 ProSiteProfiles Protein kinase domain profile. 93 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g0397 897 ProSitePatterns Protein kinases ATP-binding region signature. 99 128 IPR017441 GO:0005524
Lal16g0397 897 MobiDBLite consensus disorder prediction 527 550 - -
Lal16g0397 897 MobiDBLite consensus disorder prediction 527 555 - -
Lal16g0397 897 Gene3D Transferase(Phosphotransferase) domain 1 176 385 - -
Lal16g0397 897 SUPERFAMILY Protein kinase-like (PK-like) 74 372 IPR011009 -
Lal16g0397 897 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 488 885 - -
Lal16g0397 897 PANTHER GLYCOSYLTRANSFERASE 409 897 - -
Lal16g0397 897 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Lal16g0397 897 Pfam Protein tyrosine and serine/threonine kinase 99 369 IPR001245 GO:0004672|GO:0006468
Lal16g0397 897 Gene3D Glycogen Phosphorylase B; 487 698 - -
Lal16g0397 897 Pfam Glycosyltransferase Family 4 503 692 IPR028098 -
Lal16g0397 897 CDD STKc_IRAK 99 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0397 Lal-Chr16 2399507 2403969 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0397 409 897 Glycosyltransferase AT4G19460 64.529 0.0 654
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lal16g0397 PK_Tyr_Ser-Thr 1.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0397 - - aprc:113860121 819.305