Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0388 ATGGAACTACCATGTACCATGTTTTCCTTGTTTGCTTCTTTTCTCTTCATTCTTGTTCTTTTCAAGACATTCTTAAAGTTCTTGGTCTCCAAACGCCAACACTTGCCACTCCCACCTGGCTCCATGGGCTATCCTTACATAGGAGAAACCTTTCAAATGTATTCTCAAGACCCAAATGTCTTCTTTGCCACAAAAATCAAAAGGTATGGTTCTATGTTCAAGTCTCACATTTTGGGTTGTCCTTGTGTGATGATTTCAAGTCCAGAAGCTGCAAAGTTTGTTCTCAACAAAGCTAACCTCTTCAAACCAACATTCCCAGCAAGCAAAGAGAGGATGTTGGGAAAACAAGCTATCTTCTTTCACCAAGGACAATACCATGCTAACTTGAGGAGGCTTGTGCTTCGTACTTTCATGCCTGAAGCCATCAAAAACATTGTTCCTGCCATTGAATCCATCGCCCAAGACTGTCTCAAATCATGGGAAGGACGTGAGATAACCACTTTTCTTGAAATGAAGACGTGTTCATGTTCTCACACAATAGAAAAAACCGAAAAATCTAATAATACCAATCACAAAATTCAGAGGGTCAAGACTGATTTTGATTCTTTGTTGATATCCATTTTCACCTTCAATGTTGCCCTACTTTCAATATTTGGCAAAGAAGAAGTTCTGTATAGAGAGGATCTGAAAAGGTGTTATTACACTCTTGAGCAAGGGTACAATTCAATGCCAATTAACCTTGTTGGAACACTTTTCCACAAGGCCATGAAAGCAAGAAAGGAACTTGCACAGATAGTTGCACAAATAATCTCAAGAAGGAGGCAGGGGAATCAAGATTACACGGACTTGTTGGGTTCATTCATGGAAGAGAAAGCAGGGCTCACAGATGAACAAATAGCAGATAATGTAATTGGTGTCATATTTGCAGCGCGTGACACCACTGCCAGTGTGCTCACGTGGATTGTCAAGTATCTTTGTGAAAACCCCAGTGTCCTACAAGCTGTTACTGAGGAACAAGAATCCATATTGAAGAGCAAGAAAGAAATTGGTGATGAGAAGGGTTTGAATTGGGAAGATGCCAAAAAGATGCAAATAACTTCAAGGGTTATACAAGAGACTCTAAGAGTTGCTTCAATTTTGTCTTTTACTTTTAGAGAAGCAGTGGAAGATGTTGAATATGAAGGGCACCTTATACCAAAAGGATGGAAAGTACTACCATTGTTCAGAAACATACACCATAGTCCAGACAACTTCAAAGAGCCAGAGAAGTTTGATCCCTCAAGATTTGAGGCTGCTCCAAAACCCAATACTTTTATGCCATTTGGCAGTGGGATCCACGCTTGTCCAGGGAATGAATTGGCAAAGTTGGAGATGCTAGTGCTTCTACATCATCTGACCACAAAGTACAGGTGGTCTATGGAGGGTGCAAAGAATGGAATCCAATATGGCCCTTTTGCTCTTCCACAGAATGGCTTACCTGTTACATTATATTCCAAGACAAATTCAAATCCAACAAGTGGTTTTATGTCAACTTTCTAA 1539 0.4022 MELPCTMFSLFASFLFILVLFKTFLKFLVSKRQHLPLPPGSMGYPYIGETFQMYSQDPNVFFATKIKRYGSMFKSHILGCPCVMISSPEAAKFVLNKANLFKPTFPASKERMLGKQAIFFHQGQYHANLRRLVLRTFMPEAIKNIVPAIESIAQDCLKSWEGREITTFLEMKTCSCSHTIEKTEKSNNTNHKIQRVKTDFDSLLISIFTFNVALLSIFGKEEVLYREDLKRCYYTLEQGYNSMPINLVGTLFHKAMKARKELAQIVAQIISRRRQGNQDYTDLLGSFMEEKAGLTDEQIADNVIGVIFAARDTTASVLTWIVKYLCENPSVLQAVTEEQESILKSKKEIGDEKGLNWEDAKKMQITSRVIQETLRVASILSFTFREAVEDVEYEGHLIPKGWKVLPLFRNIHHSPDNFKEPEKFDPSRFEAAPKPNTFMPFGSGIHACPGNELAKLEMLVLLHHLTTKYRWSMEGAKNGIQYGPFALPQNGLPVTLYSKTNSNPTSGFMSTF 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0388 512 Pfam Cytochrome P450 38 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal16g0388 512 Gene3D Cytochrome P450 28 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal16g0388 512 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal16g0388 512 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal16g0388 512 PRINTS P450 superfamily signature 439 448 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal16g0388 512 PRINTS P450 superfamily signature 448 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal16g0388 512 SUPERFAMILY Cytochrome P450 33 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal16g0388 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 441 450 IPR017972 GO:0005506|GO:0016705
Lal16g0388 512 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal16g0388 512 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal16g0388 512 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal16g0388 512 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal16g0388 512 PRINTS E-class P450 group I signature 407 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal16g0388 512 PRINTS E-class P450 group I signature 438 448 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal16g0388 512 PRINTS E-class P450 group I signature 448 471 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal16g0388 512 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 204 497 - -
Lal16g0388 512 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 14 176 - -
Lal16g0388 512 PANTHER CYTOCHROME P450 26 204 497 - -
Lal16g0388 512 PANTHER CYTOCHROME P450 26 14 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0388 Lal-Chr16 2344045 2346878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0388 19 470 Cytochrome P450 AT5G45340 70.678 0.0 666
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0388 K09843 - gmx:100170674 796.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0388 16 2344045 2346878 Lal16g0388 16 2344045 2346878 ECH
Lal16g0388 16 2344045 2346878 Lal15g0329 15 2218951 2221658 LSH
Lal16g0388 16 2344045 2346878 Lal23g1170 23 13087371 13090217 LSH
Lal16g0388 16 2344045 2346878 Lal16g1777 16 16829832 16833881 PCT
Lal16g1777 16 16829832 16833881 Lal16g0388 16 2344045 2346878 PCT