Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0386 ATGAGGCATCGAAATCTGGTTAAGATTTTAACATGTTGTTCAAGTACAGATTACAAAGGCCAAACATTTAAAGCTCTAGTTTTTGAGTACATGGCAAATGGAAGCTTAGAACGATGGTTGCATCCAGAAATAGAAAATGCACAGCAATCCAGAACATTGAATGTTGCTCAAAGATTGAGTATTATTACTGATGTTGCTTCTGCAATCCATTATCTTCACTATGAATGTGAGCAACCGGTCGTCCACTGTGATTTAAAGCCGAGCAATATTCTTCTTGATGATTGCTTGGTAGCTCATGTGAGTGATTTTGGCATATCAAGACTGCTCTCAAGTATTGGAGTCTCTCCAAAGCAAACTAGCACAACTGGAATAAAGGGCACTATTGGTTATGCTCCTCCAGAATATGGAATGAGTTATGAGGTGTCAATTGAAGGCGACATGTATAGCTTTGGAATTCTTGTTTTAGAAATGTTAACCAGAAAGAGACCCACAGATGAAATGTTTAAAGATGGTAACACTCTTCACAACTATGTCAGAATTTCAATTCCAAATCACCTTTCACAGATTGTGGACCCAACTATGCTGTCCGAGGAATTAGAACAGAATGCTGACAATGAGAGTGTGATACTTACTGATCCTAATGTAAAGGAATGCTTACTTTCACTTTTTAGTATTGCACTAGCTTGTTCAGTGGAATCACCAAAACAAAGAATGAGTATGATTGGTGTGATCAAGGAGCTTAATCTGATCAAAGGTTCCTTCTTTCTTGTGTAA 774 0.3773 MRHRNLVKILTCCSSTDYKGQTFKALVFEYMANGSLERWLHPEIENAQQSRTLNVAQRLSIITDVASAIHYLHYECEQPVVHCDLKPSNILLDDCLVAHVSDFGISRLLSSIGVSPKQTSTTGIKGTIGYAPPEYGMSYEVSIEGDMYSFGILVLEMLTRKRPTDEMFKDGNTLHNYVRISIPNHLSQIVDPTMLSEELEQNADNESVILTDPNVKECLLSLFSIALACSVESPKQRMSMIGVIKELNLIKGSFFLV 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0386 257 ProSiteProfiles Protein kinase domain profile. 1 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g0386 257 SUPERFAMILY Protein kinase-like (PK-like) 1 247 IPR011009 -
Lal16g0386 257 ProSitePatterns Serine/Threonine protein kinases active-site signature. 80 92 IPR008271 GO:0004672|GO:0006468
Lal16g0386 257 Gene3D Transferase(Phosphotransferase) domain 1 31 254 - -
Lal16g0386 257 PANTHER OS04G0122200 PROTEIN 1 255 - -
Lal16g0386 257 PANTHER LRR RECEPTOR-LIKE KINASE 1 255 - -
Lal16g0386 257 SMART serkin_6 2 255 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g0386 257 Pfam Protein kinase domain 1 182 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0386 Lal-Chr16 2323234 2330930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0386 1 255 Receptor kinase-like Gene Family AT3G47570 49.421 7.47e-78 252
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lal16g0386 Pkinase 7.3e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0386 - - gmx:100792724 382.489