Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0379 ATGATCTTTGGCAAAATCGCTGAAGCCATATCCAACAATAACAATATCCGAATCTCTTCCTCTGTTCAAGATCTCCCCTCATACCGCAACCTCGACCTCGAACATGCCCATGATGTCACAAATTCTTCTGTTGCTGTTCCCACCCATTTGAAGCAACCCCTTTATGCCCCTGCCTCTAAAGGTTCAATCTTGCCTTCTCGCAAGAACTGGGTCAGGCTAATCAAACTTGCACTCTGTCTCATACTATCTGTTTTTCTAATCTACGTTATTTTCACGCTTGTTTCTTCTTATTGGAATCAAGGTTCTGGTAGGTACTATGTTGTGCTCGATTGTGGTAGTACTGGGACTAGAGTTTTTGTTTACCATGCTTTCATTGAACACAAGAAACATAGTACTCTTCCCATAGCTATTAAGTCATTGAATGATGGTGTGATAAAGAAACGTGGTTCTATGAGAGGGCGTGCTTATAATAGAATGGAAACTGAACCTGGTGTTGATAAGTTAGTGCATAATGTGGCTGGTTTGAAGGGTGCATTGGAACCATTGGTTAGATGGGCAGAGAAGCAAATTCCAAAGCATGCTCATAGGAGCACTGCTTTGTTCCTTTATGCTACTGCCGGTGTCCGGAGGCTTCCTGAAAATGACTCTAAATGGCTTCTAGATAATGCCTGGTCTGTGTTAAAGGAGTCTCCTTTCATGTGCACAAAGGATTGGGTTAAGATCATATCTGGTACTGAGGAAGCTTATTTTGGATGGATATCACTTAATTATGATAGTGGCATCTTAGGGGTTAGGCCTAGGAAGGCGACTTATGGTGCACTTGACTTAGGTGGCTCATCCTTGCAGGTTACTTTTGAGAGTGATCAGCAGTTGAGTAGTGAGACTAGCTTGTATGTTAGGATTGGATCAGTAAATCATCATCTCACAGCATATTCGCTATCTGGGTATGGTCTTAATGAGGCATTTGATAAGTCTGTGGTGCATCTTTTTAAGAAAGAATTTGGACCCACCAATATATCTAATAAAAAGGTAGTGCTCAAGCATCCTTGCTTGCAGTCTGGGTACAAGAACCAATACATGTGCTCTCATTGTTCTTATGGTAACAAAGAAGGTGGAAGTCCTGTTGATGGGAAACAATTGGGCAATAAAGGGAAATTAGGAACTCCAGTGGTGCTTGTTGGTGCTCCAAATTGGCAAGAATGCAGTGCGATCGCAAAAGTTGCTGTTAATTTGTCTGAATCGTCCAATTTCAGTAAAGGACTTGACTGTCAGGTGCATCCTTGTGCTTTGCGTGATAATTTCCCTCGCCCATATGGTCACTTTTATATGATTTCTGGATTTTATGTGGTGTATCGTTTTTTCAACTTGACTTCCGAAGCCACACTTGATGATGTATTGGAAAAGGGTAGGGTTTTCTGTGAAAAAAGATGGGATGTTGCAAAGAAAAGTGTTCCTCCTCAACCCTTTATAGAGCAGTACTGCTTTAGGGCACCATACATTGCCTCACTTCTGAGAGAGGGTTTGCACATTACTGATAATCAAATAACTGTTGGTTCTGGAAGTATCACCTGGACTCTTGGGGTTGCCTTGTTGGAAGCTGGAAAGGCATATTCCTCTACATTTGGGCTTCACAGTTTTGAATTGTTCCAAACGAAGATAAATCCACTCATTCTTATTTCCATTTTGTTGCTTTCTTTGATTCTCGTTCTTTGTGCTTTATCATTTGTTGGCAATTGGATGCCAAGGTTTTTCTGGAGGCAATATCTTCCAATTTTCAGGCATAAAAGTGTTTCCAGTGCTTCTGGTCTTAATATCCCATCTTCTTTTCGGTTCCAGCGATGGAGTCCCATGAATTCTGGAGATGGAAGAACAAAAATGCCACATAGCCCAACAATTGCAGGTTCGCAAGGAAACCCATTTGCCCAGGGGCATGGTCTCGGTGATAATGGTAGTGCCATCCAGATTATGGAGTCTTCCTTGTATCCATCAGCTAGTAGTGCCTCACATAGTTATTCCTCAAACAATTTAGGGCAGATTCAGTTTGACAATAGTACTTTGGGATCCTTCTGGCCCCCCCACAGAAGTCAGATGCGTCTTCAGAGTAGGAGATCACAATCTAGAGAAGACTTGAATTCGTCAGTGGCTGATGCACACCTGATGCTCCAAGTTTATAATAGTCTCTCAACCTTCAACTACAAGAGGTTTTTGTCGAGATTACTGGATCTAAAGATGCCGGCCAGATTGATTGATTCCAAATGA 2259 0.4197 MIFGKIAEAISNNNNIRISSSVQDLPSYRNLDLEHAHDVTNSSVAVPTHLKQPLYAPASKGSILPSRKNWVRLIKLALCLILSVFLIYVIFTLVSSYWNQGSGRYYVVLDCGSTGTRVFVYHAFIEHKKHSTLPIAIKSLNDGVIKKRGSMRGRAYNRMETEPGVDKLVHNVAGLKGALEPLVRWAEKQIPKHAHRSTALFLYATAGVRRLPENDSKWLLDNAWSVLKESPFMCTKDWVKIISGTEEAYFGWISLNYDSGILGVRPRKATYGALDLGGSSLQVTFESDQQLSSETSLYVRIGSVNHHLTAYSLSGYGLNEAFDKSVVHLFKKEFGPTNISNKKVVLKHPCLQSGYKNQYMCSHCSYGNKEGGSPVDGKQLGNKGKLGTPVVLVGAPNWQECSAIAKVAVNLSESSNFSKGLDCQVHPCALRDNFPRPYGHFYMISGFYVVYRFFNLTSEATLDDVLEKGRVFCEKRWDVAKKSVPPQPFIEQYCFRAPYIASLLREGLHITDNQITVGSGSITWTLGVALLEAGKAYSSTFGLHSFELFQTKINPLILISILLLSLILVLCALSFVGNWMPRFFWRQYLPIFRHKSVSSASGLNIPSSFRFQRWSPMNSGDGRTKMPHSPTIAGSQGNPFAQGHGLGDNGSAIQIMESSLYPSASSASHSYSSNNLGQIQFDNSTLGSFWPPHRSQMRLQSRRSQSREDLNSSVADAHLMLQVYNSLSTFNYKRFLSRLLDLKMPARLIDSK 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0379 752 Pfam GDA1/CD39 (nucleoside phosphatase) family 102 531 IPR000407 GO:0016787
Lal16g0379 752 MobiDBLite consensus disorder prediction 619 640 - -
Lal16g0379 752 PANTHER GDA1/CD39 NUCLEOSIDE PHOSPHATASE FAMILY PROTEIN 67 694 - -
Lal16g0379 752 Gene3D Exopolyphosphatase. Domain 2 244 519 - -
Lal16g0379 752 Gene3D - 96 243 - -
Lal16g0379 752 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 67 694 IPR000407 GO:0016787
Lal16g0379 752 MobiDBLite consensus disorder prediction 619 638 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0379 Lal-Chr16 2281396 2288038 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0379 14 720 Nodulin-like Gene Family AT4G19180 59.187 0.0 802
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0379 - - adu:107487370 1019.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0379 16 2281396 2288038 Lal23g1178 23 13163316 13168642 LSH
Lal16g0379 16 2281396 2288038 Lal16g1775 16 16802571 16806851 PCT
Lal16g1775 16 16802571 16806851 Lal16g0379 16 2281396 2288038 PCT