Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0378 ATGCTTTCACTTCTATGCAATTTCAGCCCCCACAATAAGCCTAACATGGTTCGACGGTCAAACGTCGCCACCATCACCGCCATCATCACCATACTCCTCCTGATCCCGGCCACAACCTCTGAAGCTCAGATTCTTAAATACGAGGAGCACGTTTATGGTCCCTTCAACAATTCTTACGTCTTTGGTCCCCTTGACAACGTCTTCGAAGTCCTATCCAACGCTTCCATCAACCTCGGCTCTCTTCAAATAACTCCTGACAGCATCGGCAACATCACCCTCCGCAACAGCTCCGGCAGAATCTTCTACTCACAACCCTTCAAGTTATGGGATGATGATCACGGTGGTGTACTTGCTTCATTTAACACTTCATTCCTTATCAATGTATTCCGAGTTAACCCCAATATTCCCGGTGAAGGCATAGCCTTTGTTATTGCACCTTCTCTCTCTATTCCTCTTAACAGCCACGGCGAATACCTTGGCCTCACCAACGCCACCATCGACGGCAACGGAACAAACAAATTTGTCGCCGTTGAACTCGACACCGTGAAGCAAGATTTTGACCTTGATGACAATCATATTGGACTTGACATCAATAGCGTGAGGTCTAACGTGAGTGTTTCTTTGTCGAAGTTTGGGATTCAGATCTCCCCCAATGGGACAGTGTTCCATGTGATATGGGTGGATTACGATGGAGAACGCAAGATCATTGATGTTTACATCGCGGACCAAGATGATAGTAATGCTCCTATAGCAGCAAAGCCAACAAAGCCTGTGTTGAGTTCGAGTCTTGATCTAAAAAGTGTGGTGAATCAACGATCTTATTTTGGATTTTCTGCTTCAACTGGAGTGGGCATTGAGTTGAACTGTGTGTTGAGATGGAATATATCTATTATGGTTTTTCCTGAAAAAAAGAGTAAAGATTGGAAATACATGGCGATTGGTTTGGGTGTTGGGGTGCCTCTGGTTTTGATAGGGATTGGTGGGTTGGTGTATTTTCTGTTAAAGAAGAAAAGTGCAAATGCTTCTGATCAAATTATGGGTACCTTGAAGAGTCTTCCAGGTACACCTAGAGAATTTAGATATCAGGAATTGAAGAAAGCTACTAACAATTTTGATGAAAAGAATAAGCTTGGACAAGGTGGGTATGGTGTGGTTTACAAAGGAACACTTCCAAAGGAGAATTTGGAAGTAGCTGTTAAGAGGTTTTCAAGGGACAAGATGAAAAGCACAGATGATTTTTTGTCTGAGCTTACCATAATCAATCGTCTCCGTCACAGACACCTTGTTCGTTTACTAGGGTGGTGTCACAAAAATGGGATATTGCTCTTAGTATATGAATATATGCCTAATGGAAGCTTAGACAGTCATATTTTTTGTGAGGAAGGGTCAAGTATTGAAACTACTCTAAGTTGGCATCTGAGATATAAGATCATATCAGGGGTAGCTTATGCATTGAATTACTTACACAATGAGTATGATCAAAAAGTGATACACCGAGACCTGAAGGCGAGCAACATCATGTTGGACTCAGACTTCAATGCTCGGCTAGGTGACTTCGGCTTGGCACGTGCAATTGAGAATGAGAAAACATCATATGCAGAATTGGAAGGAGTACATGGCACCATGGGATACATTGCACCTGAATGCTTTCACACAGGTAAGGCCACTCGCGAATCCGATGTTTATGGATTCGGTGCTATCCTACTAGAAGTTGTGTGCGGTCAGCGGCCTTGGACAAAGATCGGGTGCTATCAGTTGTTGGTGGATTGGGTTTGGTTCTTGCATAGGGAGAGAAGGATACTGGAAGCAGTAGATCCTAGACTTGACAACAATTATGTGATTGAAGAGGCAGAGAGGATCTTGAAACTAGGACTAGCTTGCTCTCATCCCATTGCTAGTGAAAGACCTAAAATGCAAGCAATTGTTCAAATCATATCTGGCTCAGTGGCTGTGCCTCATGTCCCACACTTCAAGCCATCTTTTGTGTGGCCATCTGTGAATTTTAGCAACTTTGATAGTGAGATTACAGCAACAAGTACTACAGAGTTTGCACCCTTCAACACACAGTCTTCTTCTGTGCACATTGAATTATCTAATGTCAGCTCTATGACCTAA 2115 0.4312 MLSLLCNFSPHNKPNMVRRSNVATITAIITILLLIPATTSEAQILKYEEHVYGPFNNSYVFGPLDNVFEVLSNASINLGSLQITPDSIGNITLRNSSGRIFYSQPFKLWDDDHGGVLASFNTSFLINVFRVNPNIPGEGIAFVIAPSLSIPLNSHGEYLGLTNATIDGNGTNKFVAVELDTVKQDFDLDDNHIGLDINSVRSNVSVSLSKFGIQISPNGTVFHVIWVDYDGERKIIDVYIADQDDSNAPIAAKPTKPVLSSSLDLKSVVNQRSYFGFSASTGVGIELNCVLRWNISIMVFPEKKSKDWKYMAIGLGVGVPLVLIGIGGLVYFLLKKKSANASDQIMGTLKSLPGTPREFRYQELKKATNNFDEKNKLGQGGYGVVYKGTLPKENLEVAVKRFSRDKMKSTDDFLSELTIINRLRHRHLVRLLGWCHKNGILLLVYEYMPNGSLDSHIFCEEGSSIETTLSWHLRYKIISGVAYALNYLHNEYDQKVIHRDLKASNIMLDSDFNARLGDFGLARAIENEKTSYAELEGVHGTMGYIAPECFHTGKATRESDVYGFGAILLEVVCGQRPWTKIGCYQLLVDWVWFLHRERRILEAVDPRLDNNYVIEEAERILKLGLACSHPIASERPKMQAIVQIISGSVAVPHVPHFKPSFVWPSVNFSNFDSEITATSTTEFAPFNTQSSSVHIELSNVSSMT 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0378 704 Pfam Protein kinase domain 372 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g0378 704 CDD lectin_legume_LecRK_Arcelin_ConA 55 294 IPR001220 GO:0030246
Lal16g0378 704 SMART serkin_6 371 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g0378 704 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.5-RELATED 28 692 - -
Lal16g0378 704 Gene3D Phosphorylase Kinase; domain 1 356 447 - -
Lal16g0378 704 SUPERFAMILY Protein kinase-like (PK-like) 352 644 IPR011009 -
Lal16g0378 704 CDD STKc_IRAK 377 645 - -
Lal16g0378 704 ProSitePatterns Serine/Threonine protein kinases active-site signature. 496 508 IPR008271 GO:0004672|GO:0006468
Lal16g0378 704 ProSiteProfiles Protein kinase domain profile. 371 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g0378 704 PANTHER - 28 692 - -
Lal16g0378 704 ProSitePatterns Protein kinases ATP-binding region signature. 377 400 IPR017441 GO:0005524
Lal16g0378 704 Gene3D - 54 313 - -
Lal16g0378 704 SUPERFAMILY Concanavalin A-like lectins/glucanases 69 299 IPR013320 -
Lal16g0378 704 Gene3D Transferase(Phosphotransferase) domain 1 448 651 - -
Lal16g0378 704 Pfam Legume lectin domain 69 303 IPR001220 GO:0030246
Lal16g0378 704 ProSitePatterns Legume lectins beta-chain signature. 175 181 IPR019825 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0378 Lal-Chr16 2276543 2280525 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0378 79 654 Receptor kinase-like Gene Family AT3G53810 39.570 4.51e-128 393
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lal16g0378 Pkinase 2.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0378 - - gmx:100780014 951.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0378 16 2276543 2280525 Lal15g0317 15 2112487 2115603 LSH