Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0376 ATGGCTTCTTCCAGTTATGCTAAAAGCAGTGCTTTCTTTTATCTGATTCTTGCGCTGCTTATTGCAAAAACCAGCTTTTGCTTTTCTGCCAAGGTTTATGTGGTGTACATGGGAAGCAAAACTGGTCAAGACCCAGATGATATTATTAAGGAAAACCATCAAATTATTGCTTCTGTTCATAATGGAAGTGTTGAGAAAGCCCAAGCTTCACATGTTTATAGCTATAGACATGGTTTCAGAGGCTTTGCAGCCAAAATGACTGATGAACAGGCTTCCCAAATTTCAAAGATGCCAGGAGTAGTTTCTGTTTTTCCCAATTCTAAAAGAAAGTTACACACTACTCATTCATGGGACTTCTTGGGTCTTATGAATAATGAAGCCATGGAGATTCAAGGACATTCCACAAAAAACCAGGCAAATATCATTGTAGGTTTCATTGATACAGGAATTTGGCCTGAATCTCCAAGCTTTAGAGACACTGACATGCCACCAGTGCCACCTGGATGGAAGGGCCACTGTCAAATAGGAGAAGCATTCAATTCTTCATCTTGCAACAGGAAAGTGATAGGGGCTAGATACTATATGAGTGGATATCAAGCTGAAGAAGGGTCAGACAAAAAAGTCTCTTTCAGATCTCCTAGGGATAGCTTAGGTCATGGGAGCCATACTGCTTCCACAGCAACAGGGCGCTACGTGACAAACATGAATTATAAGGGACTTGCAGCTGGAGGAGCTAGAGGAGGTGCACCTATGGCTAGGATTGCTGTATACAAAACATGTTGGAATTCAGGTTGCTATGATGTGGACTTGCTAGCTGCATTTGATGATGCAATAAGAGATGGGGTTCACATTATATCCTTGTCTCTAGGCCCTGAATCTCCTCAAGGTGACTATTTCAAAGATGCCATATCAGTGGGATCATTTTATGCTGCTAGGCATGGGGTGCTGGTGGTAGCATCAGCTGGCAATGAAGGAAGTCCTGTTTCTGTAACCAACCTTGCACCATGGATGATCACTGTTGCTGCTAGTTCAACAGATAGGGATTTCACCTCTGATATCATGTTAGGAAATGGTGTCAACATCACGGGTGAAAGTCTCAGTCTCTTGGAAATGAATGCCTCCACAAGAATAATTTCTGCGACTGATGCCTTTGCAGGATATTTTACCCCTTATCAATCCAGTTACTGTCTAGATAGCTCCCTAAATAAGACCAAGAGCAAAGGGAAGGTTCTGGTGTGTAGACATGTTGAGAGTTCAACAGAGTCAAAGTTGGAAAAAAGTAAGGTAGTTCAAAAGGCAGGTGGGGTTGGGATGATACTTATTGATGAGACAGATCAAAATGTTGCCATCCCATTTGTGATCCCTTCAGCTATTGTGGGAAATAAAGCAGGGGAACGAATTCTGTCCTATATCAATAGCACACGTAAGCCTATGTCAAGGATATATGGAGCCAAGACGGTACTAGGAACTCAGCCTGCACCCCGCGCAGCAGCATTTTCTTCTAAAGGCCCCAATGCTTTAACACCAGAAATTTTGAAGCCTGATATTATGGCTCCCGGATTAAACATCCTCGCAGCATGGTCTCCAGCAGCAGCTGGAAACATGAGGTCCAATATTCTATCGGGAACTTCTATGGCTTGTCCTCATGTAACTGGAATTGCAGCTTTAGTCAAAGCTGTCCATCCTTCATGGTCTCCGTCTGCTATCAAATCTGCCATAATGACAACTGCTACAATTCTTGATAAGCACCACAAACCCATTAGAGCCGATCCTGATAGAAAGGCTAATGCCTTCGATTATGGATCAGGATTTGTAAACCCCACAAGAGTTCTTGAACCTGGTCTTGTCTACGATTCACAGCCAGAAGATTTTATTGCATTCCTCTGTTCACTTGGTTATGATGAGAGATCACTCCATTTTGTTACAAGAGACAACAGTACATGTGATGGGGCATTCAAAACTCCATCCGACCTCAACTATCCATCTATTGCAGTGCCAAATCTTGAAGATAAATATTCAGTAACTCGAGTGGTGACTAATGTTGGAGAAGCAATAAGCATATATAAAGTTGTAGTAGTCCCTCCTGCTGGAGTTAATGTTACTGTTGTGCCAAACCGGTTAGTCTTCACAAGAATAGGACAGAAAATGAAGTTTACTGTGAATTTCAAAGTGGCCTCTCCTTCAAAGGGCTATTTGTTTGGGTTCTTGGCATGGAAGAATGGAAGAACACAGGTTACTACTCCTTTAGTTGTTCGAGTTGCATCAACAAGCCTTGGGTTGGTCAGATAA 2289 0.4246 MASSSYAKSSAFFYLILALLIAKTSFCFSAKVYVVYMGSKTGQDPDDIIKENHQIIASVHNGSVEKAQASHVYSYRHGFRGFAAKMTDEQASQISKMPGVVSVFPNSKRKLHTTHSWDFLGLMNNEAMEIQGHSTKNQANIIVGFIDTGIWPESPSFRDTDMPPVPPGWKGHCQIGEAFNSSSCNRKVIGARYYMSGYQAEEGSDKKVSFRSPRDSLGHGSHTASTATGRYVTNMNYKGLAAGGARGGAPMARIAVYKTCWNSGCYDVDLLAAFDDAIRDGVHIISLSLGPESPQGDYFKDAISVGSFYAARHGVLVVASAGNEGSPVSVTNLAPWMITVAASSTDRDFTSDIMLGNGVNITGESLSLLEMNASTRIISATDAFAGYFTPYQSSYCLDSSLNKTKSKGKVLVCRHVESSTESKLEKSKVVQKAGGVGMILIDETDQNVAIPFVIPSAIVGNKAGERILSYINSTRKPMSRIYGAKTVLGTQPAPRAAAFSSKGPNALTPEILKPDIMAPGLNILAAWSPAAAGNMRSNILSGTSMACPHVTGIAALVKAVHPSWSPSAIKSAIMTTATILDKHHKPIRADPDRKANAFDYGSGFVNPTRVLEPGLVYDSQPEDFIAFLCSLGYDERSLHFVTRDNSTCDGAFKTPSDLNYPSIAVPNLEDKYSVTRVVTNVGEAISIYKVVVVPPAGVNVTVVPNRLVFTRIGQKMKFTVNFKVASPSKGYLFGFLAWKNGRTQVTTPLVVRVASTSLGLVR 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0376 762 ProSiteProfiles Serine proteases, subtilase domain profile. 116 611 - -
Lal16g0376 762 SUPERFAMILY Subtilisin-like 13 712 IPR036852 GO:0004252|GO:0006508
Lal16g0376 762 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 21 755 - -
Lal16g0376 762 CDD Peptidases_S8_3 110 578 IPR034197 -
Lal16g0376 762 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 112 IPR037045 -
Lal16g0376 762 Gene3D - 628 754 - -
Lal16g0376 762 Pfam Peptidase inhibitor I9 32 112 IPR010259 -
Lal16g0376 762 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Lal16g0376 762 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Lal16g0376 762 PRINTS Subtilisin serine protease family (S8) signature 541 557 IPR015500 -
Lal16g0376 762 Pfam Subtilase family 140 580 IPR000209 GO:0006508|GO:0008236
Lal16g0376 762 Pfam PA domain 384 467 IPR003137 -
Lal16g0376 762 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 21 755 IPR045051 -
Lal16g0376 762 Pfam Fibronectin type-III domain 657 751 IPR041469 -
Lal16g0376 762 Gene3D Peptidase S8/S53 domain 140 624 IPR036852 GO:0004252|GO:0006508
Lal16g0376 762 Gene3D - 346 488 - -
Lal16g0376 762 ProSitePatterns Serine proteases, subtilase family, serine active site. 542 552 IPR023828 -
Lal16g0376 762 MobiDBLite consensus disorder prediction 205 224 - -
Lal16g0376 762 CDD PA_subtilisin_like 355 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0376 Lal-Chr16 2262946 2270372 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0376 33 753 Subtilisin-like Serine Gene Family AT2G04160 43.124 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0376 - - gmx:100780538 1270.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0376 16 2262946 2270372 Lal15g0315 15 2100031 2104824 LSH