Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0363 ATGATTAAACTTTGGCTCTTGGTACTCATGGTTCTTTCCAATGGATTCTCTTCAACTGGGGCTGGCATGCATAATTCCACTATACCTGACTCTGTAAGTATTGGGGCTCTCTTCTCTTTCAATACCACTGTTGGTAGAATGGTAAAACTTGCGATAGAAGCTGCTGTTGAAGACGTAAATTCTGATCCGTCTATTCTTGTTAAAACTAAGCTGAATATCTCACTGCAAGAAGATTCTAAATACCAAGGTTTTTTGAGCATTTCTGAGGTATTGCAGGTCATGGCGAGGCACACTGTGGCAATAATTGGCCCCCAGACCTCTACAACAGCCCATGTCATAACACATATTGCAAACGAGCTCCAAGTTCCCCTGCTGTCATTTTCAGCTAATGACCCCACCCTTTCTTCACTTCAATTCCCATTCTTCATCAGAACTGGTCCTAATGATCTTTATCTAATGACTGCAATAGCAGACTTTGTTAACTATTACGGGTGGAAAGATGTTATTGCTGTATATGTTGATGATGACAATGGGAGGAATGGAATCAGTGCATTAGGTGATAAGCTTTCTGAGAGACGTTGCAAGATCTCATATAAAGCACCTATGAGCCCTGGAGCAACTCGGGAGGAAATTACGGATTTGCTTGTTCAGGTGGCTCTAGCAGAATCACGAATTATAGTTGTTCACACAAATACTAATTGGGGGCCCAAGGTGTTTAGTGTGGCTAAGCATCTTGGGATGATGGGAGCTGGGTATGTCTGGATAGCCACTGGTTTTCTCTCTGCTATTCTTGACATAGATAGTCCCCTCTCTTCAGATGTAATGGATGAAATTCAAGGAGTTATTACACTACGTATGCACACACCAGATTCGGAGCTCAAAAGAAGGTTTATTTCTAGGTGGAAAAACCTGGCTGCACACAATAATGGCGATAGCCCTCTTGGGTTGAGTCCTTTGGGTCTCTATGCATATGATACTGTTTATGTACTTGCTTGTGCCCTTGATACGTTTTTCGAACAAGGGAACTCAATCACATTCTCAAATGATTCCAAGTTATCTACACTGCATGGAGACAACTTGCATCTTGAAGCCTTGAAAATCTTTAATGAAGGGAGTTTATTACGTAAAAGTATTCATGATATTAACATCATTGGTGTATCAGGTCAATTCAAGTATACATCTGGTGGAGACCTTGTAAATCCCGCTTATGAAATCATCAATGTGATTGGAACAGGGTCAAGGAGGATTGGTTATTGGTCTAATTACTCTGGATTATCAGTTGTTCCACCAGAAGCTCTTTATTCGAAACCAGTCAATCATTCCAATTTAAGTCAAAAGCTACTCCCTGTGATTTGGCCTGGAGACACAACCCAGAAACCTCGTGGTTGGGTTTTTCCAAACAATGGAAGGCTCTTAAGAATTGGAGTACCAAAAAGGGTTAGTTACCAAGAATTTGCAACACAAATACAAGGGACTGAATACTTCAAGGGATTCTGCATTGACGTGTTTATTTCTGCAGTGAACTTGCTGCCTTATGCTGTCCCCTATAAGTTTATCCCATATGGGGATGGTCAAAACAATCCTAGTGACACTGAGCTTGTCCGTTTGATCACAACGGGTGAATTTGATGGAGCAATAGGTGACATTACAATTACAACACAAGGAACAAAGATGGTGGATTTTACTCAGCCATTTATGGAGACTGGTCTGGTGGTAGTAGCACCAGTTAGGCAGTCAGACTCCAATGCTTGGGCTTTTTTGGCCCCATTTACGCCAACAATGTGGGGTGTCACAGCTAGCTTTTTCATATTCATGGGAGCTGCTATTTGGATTTTGGAGCATAGGGTGAATGATGATTTTAGGGGACCTCCCAAAAAACAAGTGGTAACTGTTTTATGGTTTAGTTTTTCAACTATGTTCTTTTCCCATAGGGAAAATACAGTAAGCACACTTGGTCGCTTCGTGCTCCTTATATGGTTATTTGTAGTTCTGATAATTAACTCGAGTTACACTGCAAGCCTAACCTCAATCCTCACAGTGCAACAACTTTCTTCACCTATTAAAGGCATTGAAAGTTTAATAAATAGCAAAGATCCTATTGGGTATGTGCAGGGTTCTTTTGTTAGAAACTATTTAGTTCAGGAAATTGGTATTGATGCATCCAGGCTAATCCCTCTAAAAACACCTGAAGAATCTTCTGAAGCACTTAAAAAGGGTCCCCAAAAGGGTGGTGTTGCTGCATACATTGACGAGCGTGCTTACATAGAGCTCTTTCTTTCAACCCGGTGTGATTTTACTATTGTAGGTCCAGAGTTCACTAGAAATGGATGGGGATTTGCCTTTCCACGAGACTCGCCATTAGCAGTTGACCTGTCAACAGCCATTTTGCAAATATCAGAGAATGGAGATTTACAAAGGATCCATGACAAATGGCTTTTGAGTAGAGCTTGTTTATCACAAGGTGCAAAGCTTGAAGTAGAAAGACTCAACCTTAGAAGCTTTTGGGGTCTGTATCTACTCTGTGGTCTTTCCTGCTTGCTTGCCCTCTTCATTCATCTTATTCAGATAATGAGGCAGTATATTAAGCACCACTCACATGAACTTGAGGCTACTAACCAAAGCTCAGGATCAAGATCTTCTCGTCTTCGAACTTTCGTTTCATTTATGGATGAAAAAGAAGAGACCGTTAAGAACCGATCCAAGAGAAGACAAATGGAGAGGATCTCAAACAGAAGCAATGAGGGTGGATCTTCCATCAACTCCAATAAAGGATATGCTTCTTCTACCAGAAGTGGTTTTGCTAATGAAGCCTGA 2814 0.4115 MIKLWLLVLMVLSNGFSSTGAGMHNSTIPDSVSIGALFSFNTTVGRMVKLAIEAAVEDVNSDPSILVKTKLNISLQEDSKYQGFLSISEVLQVMARHTVAIIGPQTSTTAHVITHIANELQVPLLSFSANDPTLSSLQFPFFIRTGPNDLYLMTAIADFVNYYGWKDVIAVYVDDDNGRNGISALGDKLSERRCKISYKAPMSPGATREEITDLLVQVALAESRIIVVHTNTNWGPKVFSVAKHLGMMGAGYVWIATGFLSAILDIDSPLSSDVMDEIQGVITLRMHTPDSELKRRFISRWKNLAAHNNGDSPLGLSPLGLYAYDTVYVLACALDTFFEQGNSITFSNDSKLSTLHGDNLHLEALKIFNEGSLLRKSIHDINIIGVSGQFKYTSGGDLVNPAYEIINVIGTGSRRIGYWSNYSGLSVVPPEALYSKPVNHSNLSQKLLPVIWPGDTTQKPRGWVFPNNGRLLRIGVPKRVSYQEFATQIQGTEYFKGFCIDVFISAVNLLPYAVPYKFIPYGDGQNNPSDTELVRLITTGEFDGAIGDITITTQGTKMVDFTQPFMETGLVVVAPVRQSDSNAWAFLAPFTPTMWGVTASFFIFMGAAIWILEHRVNDDFRGPPKKQVVTVLWFSFSTMFFSHRENTVSTLGRFVLLIWLFVVLIINSSYTASLTSILTVQQLSSPIKGIESLINSKDPIGYVQGSFVRNYLVQEIGIDASRLIPLKTPEESSEALKKGPQKGGVAAYIDERAYIELFLSTRCDFTIVGPEFTRNGWGFAFPRDSPLAVDLSTAILQISENGDLQRIHDKWLLSRACLSQGAKLEVERLNLRSFWGLYLLCGLSCLLALFIHLIQIMRQYIKHHSHELEATNQSSGSRSSRLRTFVSFMDEKEETVKNRSKRRQMERISNRSNEGGSSINSNKGYASSTRSGFANEA 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0363 937 SMART GluR_14 473 814 IPR001320 GO:0015276|GO:0016020
Lal16g0363 937 MobiDBLite consensus disorder prediction 910 937 - -
Lal16g0363 937 SUPERFAMILY Periplasmic binding protein-like I 28 464 IPR028082 -
Lal16g0363 937 SUPERFAMILY Periplasmic binding protein-like II 447 814 - -
Lal16g0363 937 Pfam Ligand-gated ion channel 813 844 IPR001320 GO:0015276|GO:0016020
Lal16g0363 937 Pfam Bacterial extracellular solute-binding proteins, family 3 531 812 IPR001638 -
Lal16g0363 937 MobiDBLite consensus disorder prediction 893 937 - -
Lal16g0363 937 Gene3D - 50 400 - -
Lal16g0363 937 Gene3D - 583 707 - -
Lal16g0363 937 CDD PBP1_GABAb_receptor_plant 33 429 IPR044440 -
Lal16g0363 937 Pfam Receptor family ligand binding region 48 410 IPR001828 -
Lal16g0363 937 Gene3D - 470 582 - -
Lal16g0363 937 CDD GluR_Plant 472 812 - -
Lal16g0363 937 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 11 929 - -
Lal16g0363 937 Gene3D - 148 425 - -
Lal16g0363 937 Gene3D - 708 815 - -
Lal16g0363 937 PANTHER GLUTAMATE RECEPTOR 11 929 - -
Lal16g0363 937 PIRSF IGluLR_plant 1 935 IPR017103 -
Lal16g0363 937 MobiDBLite consensus disorder prediction 893 909 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0363 Lal-Chr16 2183097 2188926 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0363 5 909 Ion Channels AT3G51480 58.609 0.0 1123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0363 K05387 - gmx:100793320 1452.96