Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0355 ATGGGAGGCTTATTGCACTTTTTTGAGTTCAATCAGGGGAGGATGGCCAAGAAAGTCCATGCTCACAAGAAAAACCATGGTGGCCTGGCTCCTCCTCGAAATAGACTGGATTTGCAAGCAGAAACATCTCAGAATCACAATCAACAAAGAAAATTACCATACTCTTACGAAGTAGAAGACTGGTCTGAGAATAATTGTTACTCAAATGTGGCTTCAATGAAAAATTTGATCAATGAGGAGCTATCCAAAGGATCGAGCACCAGACAAAATGTGCCAAGCCTTGTGGCAAGGTTGATGGGGATAGATATGATGCCAGTGGAGACGAAATCTGTTGTTCCACCAGAAAGAATAAGGGAAAATATGGGGAAGAAACTTGCAAAAAAAGGAATGAATGGAAACAGTTTGGTTAGTTGGGGTTCCCCCAACTTCAATTATTCTAACCAGATGGAATTTGACTCATTTTATGGACACACATATGATGCTGGATGGAGCCCGAGTTTCCGAGAAGCAAGGTCACAGGAACATCCTCAGGAAGAGGAACTCCAGAAATTTAAGAAAGAGTTTGAAGCATATCAAGCAGCAAGGTTTGTGGAGTGTTCAAAGGTTGCTGATATTGGCAGTGCGCCTAGACGATTGCTTGCTCATGAGAACCTGAACACTGAAAAGGTGGCACATAATGCAAGTTCACAGAGAGCAGCAAATGAGAAACTTGCAGAATATGGTGGTGATATGACAGAGTTAATCCCAACTATGCCAAAGCAAGCCTTTCCTTGTAGAAGCAGAACGCTTAGTAGAGACTTTGAGGAGTGTTTAACGTTGAAATCTAAAAACAGATTAGATAGATCTTCTTCTCCTACTCAGATAGTTATCTTGAAGCCTGGTCTTGAAAGCATTTGCAACAAGGAAGAGAGTTGGAGCTGTTCTTCAAGAATTTTACAAGGGAGTAGTAGTATAGAAGAATTTCTTGAGGAAGTGAAAGAGCGGTTGAAATGTGAACTACAAGGGAAAACTGTCAAAAAATGTTCAGTGGTTGGAGGAAGTGGAATTGAGTCACCTTACACTGAAAAACCATGTGATCATAAACTGATAGCTTGTCATATAGTAAAACAGGTTACTAGAGATACTGAATCAAATTTACTCCGTTCCGAATCAGCAAGATCATACACAAGTGAAATGCAGTTCAATGGGCCAAGTTCCCCAGAATTTATCAATAGAGATACCAGGAGGTTTTTATCAGAGAGGCTAAGAAATATCATGAAATGTGAAACACATGTTGACATTCCTGAAATGATTTGTAGAAACTCCAGTTCCAATGCATTAGATGATCACAGAGTTAGACTAAATTCAGGAGATATTATCAAGTGTGCCAATGGCATGAGCTACTCAGAAGAGGAAAAACAAATGCAAACAGGATCTTTCAGGCATGAACCAGAGCCAGATGAGAATACATTGCTCCACTGCCAAAGAGAGTTGTCCCCTAGGAACCTTGTCAGATCCTTGTCTGCTCCTGTATCTGGATCAGGAACATCATTCCGGAAGCTTCTTCTCGAGGACCGCCACATTTTAACTGGTGCCCAAATTCAGAGGAAGGTTGAAGCTGATGATGTTAAAAAACTGCGAAAAGATAGATTTAATATGAAAGAAAAGGTCTCCAATTTTAGATATAGTCTTAATCTAAGAGGGAATGTTTTTGGAAAAAGGAATCAATCAATGGCAGAATCACATGTCAATAAATATGTTCCAATGGTGAGAGATGTAAGAAGTGGACCAACAGTTCTCATGAACTGTGGTGATTGGCATGAAAACTCCACTGAGGTACCTCCTAGTCCTGCATCTATGTGTAGCAGTGTTCACGATGAACACTGGAGGCAGGTAGAATATTTAAGTCCAATATCAACTCCAGATATGTCTTCAAGAGACAATAATGTTGTGTCCCATGTTTTCAGAGATATCAGCTCTGCTTTGAACGAGGTAAGGAAGAAACTCAGTCAACTTGAGTCTGATAGTGTCAACGAATTCATTACTAAACAGGAGGCTGAGCCTGATGACTCTGAATTAGTTCAAATAGAGGATCCAGCAGAATCATACATAAGAGATCTACTTATTGCTTCTGGTCTGTATTTTGGTTCATGGGATAAATCTTTATTAAGAGGGGACACATTTGCAAAGCCTATTGGCAACTCAGTTTTTGAAGAAGTGGAAGCATCTCATAAGAAATTGGTCAAGAAGAGTAATGATAGGTCTATAAAGGACCACAAGGTTTTACTTGATTTGTTAAATGAAGCACTTTCACTAGTTCTTGGACCACCTTTGACAAGGAAAATATGCAACTCTTCAGTGATGCAACAACCTTATGGAAAGGAACTATTAAAGTTAGTATGGGACATAATCCGTGTCTCTTTACATCCTCCATGTGACATATGTCCTTATTCACTTGATACTTTGGTGGCTCAACATTTGGAGTCCATCCCTTGGTCTGGATTAGTATATGATGAGATAAATGTATTAGGAAGAGATATAGAATGTCTAATAACTCGTGATCTTGTTGAAGAAATCACAAAGGATATAATGCTTAGTGTGTAG 2583 0.3949 MGGLLHFFEFNQGRMAKKVHAHKKNHGGLAPPRNRLDLQAETSQNHNQQRKLPYSYEVEDWSENNCYSNVASMKNLINEELSKGSSTRQNVPSLVARLMGIDMMPVETKSVVPPERIRENMGKKLAKKGMNGNSLVSWGSPNFNYSNQMEFDSFYGHTYDAGWSPSFREARSQEHPQEEELQKFKKEFEAYQAARFVECSKVADIGSAPRRLLAHENLNTEKVAHNASSQRAANEKLAEYGGDMTELIPTMPKQAFPCRSRTLSRDFEECLTLKSKNRLDRSSSPTQIVILKPGLESICNKEESWSCSSRILQGSSSIEEFLEEVKERLKCELQGKTVKKCSVVGGSGIESPYTEKPCDHKLIACHIVKQVTRDTESNLLRSESARSYTSEMQFNGPSSPEFINRDTRRFLSERLRNIMKCETHVDIPEMICRNSSSNALDDHRVRLNSGDIIKCANGMSYSEEEKQMQTGSFRHEPEPDENTLLHCQRELSPRNLVRSLSAPVSGSGTSFRKLLLEDRHILTGAQIQRKVEADDVKKLRKDRFNMKEKVSNFRYSLNLRGNVFGKRNQSMAESHVNKYVPMVRDVRSGPTVLMNCGDWHENSTEVPPSPASMCSSVHDEHWRQVEYLSPISTPDMSSRDNNVVSHVFRDISSALNEVRKKLSQLESDSVNEFITKQEAEPDDSELVQIEDPAESYIRDLLIASGLYFGSWDKSLLRGDTFAKPIGNSVFEEVEASHKKLVKKSNDRSIKDHKVLLDLLNEALSLVLGPPLTRKICNSSVMQQPYGKELLKLVWDIIRVSLHPPCDICPYSLDTLVAQHLESIPWSGLVYDEINVLGRDIECLITRDLVEEITKDIMLSV 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0355 860 Pfam Domain of unknown function (DUF4378) 695 851 IPR025486 -
Lal16g0355 860 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 856 - -
Lal16g0355 860 Pfam DUF761-associated sequence motif 92 105 IPR032795 -
Lal16g0355 860 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 856 - -
Lal16g0355 860 Coils Coil 648 668 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0355 Lal-Chr16 2150700 2155803 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0355 73 856 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 38.949 9.64e-144 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0355 - - gmx:100779720 1112.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0355 16 2150700 2155803 Lal15g0297 15 1990625 1998113 LSH