Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0343 ATGGATCCAATTTCAGCACATGGGCACTCTCTTCCCCCTCCTTTCCACACAACAAGAGATTTCAATATGCAGCAGCAGCAGCAGCAGCATCAATTCCACGCTTTACAGCAACAAACAACAGAAGACTCTCAAAGCGGAAGCAGCGGTGGTGGCTTGAATCTCAAAAGAGAACGCCATGAAAATAAGAACAACAGTGAAGGGAAAGAACTCGGTGGTGAAACTGAGATGTCAAGAAGACCAAGAGGAAGACCAGCTGGATCCAAGAACAAACCAAAGCCACCAATCATCATCACACGTGACAGCGCAAATGCCCTAAAGACGCACGTGATGGAAGTTGCCGACGGTTGCGACATCGTGGAAAGTGTATCCAACTTCGCTAGGCGTCGCCAAAGAGGTGTGTGCATCATGTCCGGCACCGGAACCGTTACTAATGTAACTCTTCGTCAACCAGCTTCTTCTGGTGCTGTTCTCACACTTCATGGAAGGTTCGAGATCTTGTCCCTCGCCGGATCCTTTCTCCCACCACCTGCTCCGCCCGCTGCATCTGGTTTGACTATTTATTTGGCCGGCGGGCAAGGGCAGGTTGTGGGAGGAAGTGTGGTGGGGACACTCTTGGCTTCAGGTCCTGTGATTATTATTTCGGCTTTGTTTAGTAACGCTGCTTATGAGAGACTTCCTTTGGAAGAAGATGATCCTTCTTCACTTCCACTACAAGGTAGTGGTGGTTCGATTGGGTCCCCAACTGCTGCTGGTGGGCTTGGTGGTCAACAACAGCAGAATCATCTTTTAGGAGATGCAACTACTTCACAATTTCATGGTTTGCCTCCTAATCTTCTCAACTCTATTCAGATGCCTTCAGATGCATTCTGGAATACAAGTTTACTAGTGCTCTCTATACATGGTGACAGATCCAATGGTAGTGGCTTCTTGACCATGCACTTGAGAGCATATCTATGA 957 0.4817 MDPISAHGHSLPPPFHTTRDFNMQQQQQQHQFHALQQQTTEDSQSGSSGGGLNLKRERHENKNNSEGKELGGETEMSRRPRGRPAGSKNKPKPPIIITRDSANALKTHVMEVADGCDIVESVSNFARRRQRGVCIMSGTGTVTNVTLRQPASSGAVLTLHGRFEILSLAGSFLPPPAPPAASGLTIYLAGGQGQVVGGSVVGTLLASGPVIIISALFSNAAYERLPLEEDDPSSLPLQGSGGSIGSPTAAGGLGGQQQQNHLLGDATTSQFHGLPPNLLNSIQMPSDAFWNTSLLVLSIHGDRSNGSGFLTMHLRAYL 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0343 318 MobiDBLite consensus disorder prediction 53 82 - -
Lal16g0343 318 MobiDBLite consensus disorder prediction 17 51 - -
Lal16g0343 318 MobiDBLite consensus disorder prediction 236 259 - -
Lal16g0343 318 PIRSF ESCAROLA 17 295 IPR014476 GO:0003680
Lal16g0343 318 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 24-RELATED 7 293 - -
Lal16g0343 318 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 7 293 IPR014476 GO:0003680
Lal16g0343 318 CDD DUF296 106 173 IPR005175 -
Lal16g0343 318 MobiDBLite consensus disorder prediction 229 259 - -
Lal16g0343 318 ProSiteProfiles PPC domain profile profile. 102 238 IPR005175 -
Lal16g0343 318 SUPERFAMILY AF0104/ALDC/Ptd012-like 102 233 - -
Lal16g0343 318 MobiDBLite consensus disorder prediction 1 96 - -
Lal16g0343 318 Gene3D - 105 238 - -
Lal16g0343 318 Pfam Plants and Prokaryotes Conserved (PCC) domain 106 218 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0343 Lal-Chr16 2072003 2073745 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0343 1 292 AT-hook Motif Nuclear Localized (AHL) Family AT2G45430 57.053 5.38e-81 246
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0343 - - lang:109348923 466.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0343 16 2072003 2073745 Lal16g0343 16 2072003 2073745 ECH