Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0332 ATGGACCTGAAGTCCTCTCATCTTTCTTCTGTTCCTGCTGAGCCTGTAATACCCAACAAGTCAAGACTAGGAACGCAATCTAGTTTACTAACTTATTCCCAGCAAGATTTACCACTTTCCCCTGGTAAGTACTCAAGAACGGGTTCAAGGAAAAGTGCTGCGAGTCTTGATGATGTTCGATCCAATGGTTGGTTAGATGCTATGATGGCATCTTCTCCTCCAAAGAAAAAGCCACTTAAAGGTTCCAATGCTCAGTTTTCTTCAATTGACTTTACTGTTGAAGACTATACCTCATCCATGGTTGATCATCCTTCAGCACTAGATTATTTTGACAAAATTATTGACGGTGCAAAGAATAAAAAGGTTGCAGTGTTTCTAGATTATGATGGCACTCTTTCGCCAATAGTAGATAACCCAGATTGTGCCTTTATGTCTGAAGATATGCGTGCCACTGTGAGAAGCGTAGCAAGCTATTTTCCCACGGCAATAATCAGTGGGAGAAGCCGTGACAAGGTGTTCGATTTAGTTAAACTAACGGATCTCTACTATGCTGGTAGTCATGGGATGGATATTATTTGTCCTTTTAGTCAGACTCTATCTAATAACCATCCCAGTTGTGTCAAATCTACTGACCATCAGGGAAAGGAGATAACTCTCTTTCAACCTGCAACAGAATTTCTGCCTATGATTGACGAGGTTTTTAAAACCCTTGTCGATATTACTAGAGATATAGAGGGTGTGAAAGTTGAAAACCACAAATTTTGCGTTTCTGTACATTATCGTAATGTAAATGAAAATAATTGGACAACTATTGGACAAATTGTCCATGACGTCGTAAAAAAATATCCCCGTTTACGTTCTACTCATGGACGTAAGGTTTTAGATATCCGTCCTGTGATTGATTGGAACAAAGGAAAAGCAGTTGAGTTTTTACACGAATCTCTAGGGTTAAATGATCGAGATGATGTTTTTTCCATTTACATTGGAGATGATAAAACTGATGAAGATGCTTTCAAGGTGTTGCGGGAAAGCAATCGTGGTTATGGGATTTTGGTTTCGTCAGTGAAGAAAGAAAGCAACGCTTTCTTCTCACTCGAAGACCCAACTGAGGTCATGAAATTTCTTCAACTCCTTGTGAAATGGAAGAGGCAAGGAGAAAGAAATACATCAGAGTTGTAG 1179 0.3944 MDLKSSHLSSVPAEPVIPNKSRLGTQSSLLTYSQQDLPLSPGKYSRTGSRKSAASLDDVRSNGWLDAMMASSPPKKKPLKGSNAQFSSIDFTVEDYTSSMVDHPSALDYFDKIIDGAKNKKVAVFLDYDGTLSPIVDNPDCAFMSEDMRATVRSVASYFPTAIISGRSRDKVFDLVKLTDLYYAGSHGMDIICPFSQTLSNNHPSCVKSTDHQGKEITLFQPATEFLPMIDEVFKTLVDITRDIEGVKVENHKFCVSVHYRNVNENNWTTIGQIVHDVVKKYPRLRSTHGRKVLDIRPVIDWNKGKAVEFLHESLGLNDRDDVFSIYIGDDKTDEDAFKVLRESNRGYGILVSSVKKESNAFFSLEDPTEVMKFLQLLVKWKRQGERNTSEL 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0332 392 CDD HAD_TPP 123 373 - -
Lal16g0332 392 TIGRFAM T6PP: trehalose-phosphatase 120 380 IPR003337 GO:0003824|GO:0005992
Lal16g0332 392 PANTHER TREHALOSE-PHOSPHATE PHOSPHATASE F-RELATED 1 389 - -
Lal16g0332 392 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 389 IPR044651 GO:0004805|GO:0005992
Lal16g0332 392 SUPERFAMILY HAD-like 123 383 IPR036412 -
Lal16g0332 392 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 124 342 IPR006379 -
Lal16g0332 392 MobiDBLite consensus disorder prediction 20 55 - -
Lal16g0332 392 MobiDBLite consensus disorder prediction 1 55 - -
Lal16g0332 392 Gene3D - 227 391 IPR023214 -
Lal16g0332 392 Gene3D - 122 208 IPR023214 -
Lal16g0332 392 Pfam Trehalose-phosphatase 125 368 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0332 Lal-Chr16 2000629 2008275 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0332 118 378 Trehalose Biosynthesis Gene Families AT1G70290 24.468 9.37e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0332 K01087 - jre:109011403 505.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0332 16 2000629 2008275 Lal16g0332 16 2000629 2008275 ECH