Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0325 ATGGGAAAGGTTCACGGATCTCTTGCTCGTGCCGGAAAAGTGAGAGGCCAAACTCCAAAAGTGGCGAAGCAGGACAAGAAGAAGAAGCCTCGTGGCCGTGCCCACAAGCGCATGCAATACAATCGCCGTTTCGTCACCGCCGTCGTCGGATTCGGAAAGAAGAGGGGACCTAACTCATCTGAGAAAGTAGAAAAAGAAGATAAAGAGAATGAGAGGAGAGGAGAGAAGTTGGGTAGAAATAGAGTTTTTCTCCTCTTTGGTTTAGGGGTGAATTTGAAGGGAGAGAAGGAAAAAGTGTGA 300 0.48 MGKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRMQYNRRFVTAVVGFGKKRGPNSSEKVEKEDKENERRGEKLGRNRVFLLFGLGVNLKGEKEKV 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0325 99 MobiDBLite consensus disorder prediction 22 40 - -
Lal16g0325 99 MobiDBLite consensus disorder prediction 1 75 - -
Lal16g0325 99 MobiDBLite consensus disorder prediction 57 75 - -
Lal16g0325 99 PANTHER 40S RIBOSOMAL PROTEIN S30/UBIQUITIN-LIKE PROTEIN FUBI 1 62 - -
Lal16g0325 99 Pfam Ribosomal protein S30 3 59 IPR006846 GO:0003735|GO:0005840|GO:0006412
Lal16g0325 99 PANTHER 40S RIBOSOMAL PROTEIN S30 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0325 Lal-Chr16 1949485 1950848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0325 1 62 Cytoplasmic Ribosomal Protein Gene Family AT5G56670 96.774 2.24e-30 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0325 K02983 - twl:119993596 118.627