Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0322 ATGATGAGCGTGATGGAAGATGTAGCAATAATAGGAGGGTTAATAGGAGTTCAATTTATATACGCAGGGAATGCCATGTTGATGAGTTATGCTATGTCATTAGGCCTTACCTCTCTTACCATTGTCATTTACACTTCCCTGGCTACATTCTTTCTTCTTTTCCCACTTGCTTTTTATTTTGAAAGGACCAGTTGGCCTAACAAATGCAGTATCAAGTTTATTACACAGCTTCTGCTTCTTTCTTTTGGAGGAGTAGTTTTCCAGTCTTTCTTCCTCAAAGGAATCAATCTAACTTCACCAGCAATGGGAACTGCCATGCCAAACATTGCCCCGGGCCTTATCTTCATCATCGCATGGACTTCTGGGTTAGAGAAAGTGAACTTGAGCAACACGTATAGTAAAGTAAAAATATTAGGAACATTGCTTTGTGTGTTGGGCGCTTTCACAATGAGCATTATGCAAAGCATTTCTGCTCCTGCAACTGAGAATGGGACTACAGTTAAATCATCATCGACGCCATCAGATTTCATATTTGACAAGCAGAAGATAATAGGTTGCTTCTATCTTATGGCTGCTGTCTTCATATTGTCAAGCAGCATTGTCCTTCAGGCTTTTGCACTGGGTGGTTTTCCTGCTCCAATGTCCTTGAGTGCAATAACATCCTTGTTTGGGGCATTCATGACTACAATTGTTCAGTTTATTGAAGATCACGAAGTGAAAACTGGTTGGCCACTTGTGAGTTTTGGAGACCTGATTGGCTATTCTGTACTGGCAGGTACAGTGAGTGGAATATGCCTAAGCTTCAATGGGTGGGCACTTAAGAAGAGAGGGCCAGTGTTTGTATCCATGTTTAGCCCCATTGGGACTGTCTGCTCTGTCATTTTCTCTGTTGTTACACTAGGAGACAATATTAATTTTGGAAGTCTTGCAGGTATGTTCCTCATGTTCACTGGGCTCTACTTGGTTCTTTGGTCCAAAGGGAAAGAAAGCTACGCAAATGAAGATTGCTTAGAGAGTGAGTTTGATGTAGAGAAACCTCTTTTAAGTTGA 1050 0.4133 MMSVMEDVAIIGGLIGVQFIYAGNAMLMSYAMSLGLTSLTIVIYTSLATFFLLFPLAFYFERTSWPNKCSIKFITQLLLLSFGGVVFQSFFLKGINLTSPAMGTAMPNIAPGLIFIIAWTSGLEKVNLSNTYSKVKILGTLLCVLGAFTMSIMQSISAPATENGTTVKSSSTPSDFIFDKQKIIGCFYLMAAVFILSSSIVLQAFALGGFPAPMSLSAITSLFGAFMTTIVQFIEDHEVKTGWPLVSFGDLIGYSVLAGTVSGICLSFNGWALKKRGPVFVSMFSPIGTVCSVIFSVVTLGDNINFGSLAGMFLMFTGLYLVLWSKGKESYANEDCLESEFDVEKPLLS 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0322 349 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 328 - -
Lal16g0322 349 PANTHER WAT1-RELATED PROTEIN 9 340 IPR030184 GO:0016021|GO:0022857
Lal16g0322 349 PANTHER WAT1-RELATED PROTEIN 9 340 - -
Lal16g0322 349 Pfam EamA-like transporter family 14 151 IPR000620 GO:0016020|GO:0016021
Lal16g0322 349 Pfam EamA-like transporter family 184 323 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0322 Lal-Chr16 1930805 1932782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0322 3 340 Nodulin-like Gene Family AT5G47470 57.941 9.36e-139 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0322 - - aprc:113870214 499.204