Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0304 ATGGCTGCATCAGTTAATTTTAGCCATTCTGAAGAAAGGTCGGGGAAGCGGTCAATGGAAAATAGGGACCGCTCTTCTCTTTCTCGATCTATGTATGAATGGTGTAAAGCTTCTGCCATCCGTGATTTCCCAGAAGAATGTGGACCATTTGCTTCAGGTGTTCATCCAGTATTGAAGGCAGATATTGCTGATATTGGTTCTGCCAAAGTGGAGGATAATTATGGTGGACATTCAGGGGATTATACTGTTAAAACTTCCAAGTGTGAAGATGATTTTCAGCATTTTGAGTTAAAAAGAACTTCATTTCCTACGGAGTTTCTTTACCAAACAACTGACTTTAGTTTGAAGAATGAAAATTTAATGGTCTCATCTCATCACGTCGATGGTCTTCGTTTAGATAATGACAATCCTGCAGAAGTGACGTCGGTTGGCATGGAAGCTTTGGAGGATACATGGTTGACAGGAATAGCGAACTCTGTAAAGTGTGAGTCCTCTATGCCAAAGTCATCCTCTCCGGTGGGTGAGGTGGCTTTGTCAGGTGGTTCAAATTCCTTATGCAATTTCAATGTATCTGGTTCCAGTGCTTGTATCGAGAAGGCTATTACTAGACGGTATGTTCCTCAAAGAAAACTTGCGGCTGTCAGAGACTTCCCCCCTTTTTGTGGACGCAATGCTCCAATTCTCAGTAAGGATGAGTGTCTAAAGAAGTTTTCTTTAAATAACAAGAGAGTGAGTCAACACAAATCGGCTGTAGATGACAATTCATTGGGGGGAAAAGCGACCACTATTATGAAGGAGGTGGAAAATCATATTCAAGATGAATATGCATGCAAGAGAAAGCTTGTGAACATAGTTGAAGTGGATCCTGAAAGGAATGCTACAAAGAAAGTGAAGAAGATTGATGGATTTGAACCTTCTGAGATGAATTTGACTCAGGAAAAAACAAGAGAAAAGCTGCTCACACTTCCTCAAGAAAGTAATCATCATCCACATGAAATTGGCACAAGAAAGAAAGTTGGTTTTTTTGCATGCCTTGACAGGTCTAAAGCTGCTATCAAGAGAAAAGATGCACCAAATATTTATGGTTATAAGCCATTGAAAAAGAAATTTGAATGTGCTACTACTGATGATATGGGTCAGTTAGTAGGTTGGGATAAGGATTCTCTTGACCCTAATGAACACATCAAAGACTTCCGAGTTGTCCCAAAATCACATGGTTTCAACAGTGTAAATGTTGGTGACTCAAATGAGGTCCGAAATAAAGTGAGGGAGACATTAAGCATGTTCCAAGCACTTCTTAGAAAGCTTATGCAGGAAGTGGAAGGTAAATCAAATGAGCGAGAAAATAGTCGTAGGAGGGTAGATTTTGAAGCGGCAAAGATCCTGAAGGAGGAAGGGAAATATGTTAACACAGGCAAACAAATCTTGGGATCAGTCCCTGGGATTGAAGTTGGTGATAAATTCCAGTATAGGGTGGAGCTTAATATAATTGGCCTTCATCGCCAAAGTCAGGGTGGCATAGATTATGTGAAGCACAATGGTAAGGTCCTTGCAACTAGTATTGTTGCATCAGGGGGCTATGCTAACGAGGTGGATAATTCAGATGTGTTGATATATACAGGGCAGGGTGGAAATGTGATGAGCCCTGATAAAGAACCTGAAGATCAGAAGCTTGAGCGTGGAAATCTTGCTTTGAAGAATAGCAGTGAGGTAAAGAATCCTGTTAGGGTGATACATGGCTATGAATCGATGGATGGAAGGTCCAAGGCATTGGTTTATGATGGACAATATCTGGTTGAGTCATATTGGCAGGAGATGGGGTCACATGGGAAGCTGCTCTATAAGTTTCAGATGCGTAGAATCCCAGGTCAACCTGAGCTTGCTTTCAAGAAACCCAAGAAATCTAACATGTGGTTTTGA 1920 0.4109 MAASVNFSHSEERSGKRSMENRDRSSLSRSMYEWCKASAIRDFPEECGPFASGVHPVLKADIADIGSAKVEDNYGGHSGDYTVKTSKCEDDFQHFELKRTSFPTEFLYQTTDFSLKNENLMVSSHHVDGLRLDNDNPAEVTSVGMEALEDTWLTGIANSVKCESSMPKSSSPVGEVALSGGSNSLCNFNVSGSSACIEKAITRRYVPQRKLAAVRDFPPFCGRNAPILSKDECLKKFSLNNKRVSQHKSAVDDNSLGGKATTIMKEVENHIQDEYACKRKLVNIVEVDPERNATKKVKKIDGFEPSEMNLTQEKTREKLLTLPQESNHHPHEIGTRKKVGFFACLDRSKAAIKRKDAPNIYGYKPLKKKFECATTDDMGQLVGWDKDSLDPNEHIKDFRVVPKSHGFNSVNVGDSNEVRNKVRETLSMFQALLRKLMQEVEGKSNERENSRRRVDFEAAKILKEEGKYVNTGKQILGSVPGIEVGDKFQYRVELNIIGLHRQSQGGIDYVKHNGKVLATSIVASGGYANEVDNSDVLIYTGQGGNVMSPDKEPEDQKLERGNLALKNSSEVKNPVRVIHGYESMDGRSKALVYDGQYLVESYWQEMGSHGKLLYKFQMRRIPGQPELAFKKPKKSNMWF 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0304 639 Coils Coil 433 453 - -
Lal16g0304 639 MobiDBLite consensus disorder prediction 1 24 - -
Lal16g0304 639 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH6 264 635 - -
Lal16g0304 639 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 264 635 - -
Lal16g0304 639 SUPERFAMILY PUA domain-like 458 630 IPR015947 -
Lal16g0304 639 ProSiteProfiles YDG domain profile. 477 620 IPR003105 -
Lal16g0304 639 Gene3D - 459 638 IPR036987 -
Lal16g0304 639 SMART G9a_1 472 624 IPR003105 -
Lal16g0304 639 MobiDBLite consensus disorder prediction 10 24 - -
Lal16g0304 639 Pfam SAD/SRA domain 476 624 IPR003105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0304 Lal-Chr16 1832372 1834291 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0304 402 625 Su(var)3-9 homologs AT5G04940 41.739 2.78e-40 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0304 K11420 - lang:109348878 1073.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0304 16 1832372 1834291 Lal15g0238 15 1628834 1636581 LSH
Lal16g0304 16 1832372 1834291 Lal23g1243 23 13600921 13604115 LSH