Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0299 TGTGTTAGTACAGTTGCTACCATTTCTGATGATGATGATAATAATGGCAGTCACAAGAAGTATGAGCTGAGCAGAGAAAGCGCAGAGATATCAGATATAAATATAGAAAGAAAACGGGACCTGGTTTCCGCTGGTGCTATTTGTTGGATCCACGTTAGAATAGAAATGAATGAGATGATGAAGAAATTCCTCCCGAAGACTAAGAGAACGAAGAAGGCTGGTATTGTCGGGAAATATGGTACCCGTTATGGTGCTAGTCTGCGGAAGCAGATCAAGAAGATGGAAGTTAGTCAACATAGCAAATTTTTCTGTGAGTTTTGTGGAAAGGTAGGTCTTTCATTTTTCGTTAATGTTGAGTATGCCGTGAAGAGAAAGGCCGTAGGAATATGGGGATGCAAGGATTGTGGTAAAGTGAAAGCAGGCGGTGCCTATACTCTGAATACTGCAAGTGCTGTGACTGTGCGGAGCACCATCCGGAGGTTGAGGGAACAAACCGAGGGTTGA 504 0.4325 CVSTVATISDDDDNNGSHKKYELSRESAEISDINIERKRDLVSAGAICWIHVRIEMNEMMKKFLPKTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKFFCEFCGKVGLSFFVNVEYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTEG 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0299 167 Pfam Ribosomal L37ae protein family 69 163 IPR002674 GO:0003735|GO:0005840|GO:0006412
Lal16g0299 167 PANTHER ZGC:171772 58 167 - -
Lal16g0299 167 Hamap 50S ribosomal protein L37Ae [rpl37ae]. 69 147 IPR002674 GO:0003735|GO:0005840|GO:0006412
Lal16g0299 167 SUPERFAMILY Zn-binding ribosomal proteins 75 157 IPR011332 GO:0006412
Lal16g0299 167 Gene3D - 66 167 IPR011331 GO:0003735|GO:0005840|GO:0006412
Lal16g0299 167 PANTHER 60S RIBOSOMAL PROTEIN L37A-2 58 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0299 Lal-Chr16 1813422 1816387 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0299 68 167 Cytoplasmic Ribosomal Protein Gene Family AT3G60245 84.000 1.08e-54 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0299 K02921 - gmx:100499850 180.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0299 16 1813422 1816387 Lal16g0299 16 1813422 1816387 ECH