Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0287 ATGCAGAGAAATTGTTCCTACCAAATAGAAACTTGGAATGGTTTTCTTTTGTCCAGGGGATTGCAAGTACCCAAATGGATCAAGAACAAAATAGAGCTACCAAAGCTGGCTACTGGAAAAGACAAGAAGGTTGTATGTCAGTTTAGTCCATCCGCATCCACTCTCACTGGTTACCGCAAGACCCTTGTTTTCTATCATGGAAGGGCACCTTCAGGAGATCGAACCAATTGGGTTATGCATGAGTACCGCCTCTGCGATGATCTTGTCCAACCCTCACCATCTTTTTGGGACAAGGAAACCTCATGGACACTTTATGGAAATGAGGATGTGCCTTATGAAGGTTATGTTATGACCAATTCAATGGTTGTGATGGAGGTGCTAGATGTGCTAAATGCGTGTTTCTTGAACATAAAAAAGACACATACAGTAAGTGAGAAATAG 441 0.4218 MQRNCSYQIETWNGFLLSRGLQVPKWIKNKIELPKLATGKDKKVVCQFSPSASTLTGYRKTLVFYHGRAPSGDRTNWVMHEYRLCDDLVQPSPSFWDKETSWTLYGNEDVPYEGYVMTNSMVVMEVLDVLNACFLNIKKTHTVSEK 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0287 146 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 37 91 - -
Lal16g0287 146 Pfam No apical meristem (NAM) protein 37 84 IPR003441 GO:0003677|GO:0006355
Lal16g0287 146 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 37 91 - -
Lal16g0287 146 Gene3D NAC domain 35 119 IPR036093 GO:0003677|GO:0006355
Lal16g0287 146 SUPERFAMILY NAC domain 37 93 IPR036093 GO:0003677|GO:0006355
Lal16g0287 146 ProSiteProfiles NAC domain profile. 1 110 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0287 Lal-Chr16 1708449 1709145 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0287 5 87 NAC Transcription Factor Family AT5G46590 50.602 3.16e-21 85.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal16g0287 NAM 6.1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0287 - - adu:107487585 103.219