Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0277 ATGTATCAGTTCATTTTCAATTTATTATTACACATGTTACTCAATTTTTTACTACTGTGCTCAAATCCTTTACCTCAAGTGGTGTCGATGTCTCTCACCAGAGACTTCCAAATTCTGCTGCAAGTCAAGAACACACAGCTTGATGATAAAAACAACAACCTCAAAGAATGGGTCCCAAACAGAGACCACAATCCTTGCAACTTCACTGGAATTACTTGCGATGCACGAAACAAATCAGTTATCTCCATTAACCTCTCCGAGGTTGGTGTTTATGGTAATTTCCCCTTTGGTTTCTGTCACATCCATACCCTCCAAAACCTTTCTCTTGCATCAAATTTTCTTGGCAATGCTATCTACCCACACTCACTGCTTCTCTGTTCCCACCTTCAACTCTTGAACCTCTCTGACAACTGCTTTGTCGGTGCCTTGCCGGAATTATCACCGGAATGTGATCAACTGAGAGTACTTGACCTCTCAAATAACAACTTCACCGGTGACATTCCGGGAAATTATTGTAACCTTCTACAACTAGAGGTTCTCATTTTATCTGGTAACTTAATCAGCGGAACGATTCCTTCGTTCTTAGGCAAACTCAAGTCATTAACTCAATTGGAACTAGCTTTCAATCCATTAAAGCCAGGACCTTTACCTTCCCAACTTGGAAATCTTTGTAATCTTGAAATACTTTACCTCGCCAAATTGAACCTCATAGGGGACATATCAGACTCCATTGGGAACCTTGTTTCCCTCAAGCACTTGGATTTGTCTCAAAACTCTTTGTCAGGTAAAATCCCAAACAACATTTCTGGTTTGATAAAGTTGAAGGAACTTTATCTATTTCAAAATCAACTTTCTGGTGAATTGCCACAAGGTTTGGGAAACCTCAGCAATTTAATTGACTTGGACCTCTCTCAGAACTATTTAACCGGAAAATTACCAGACACAATCGCTTCATTGCATCTTTTTTCTCTTAATTTAAACGACAATCTTCTCGAAGGAGAAATCCCCGAAATTTTAGCTTCAAACCCGAATTTACAGCATCTGAAACTCTTCAACAACAGCTTCACTGGGAAGTTACCTCAGATTCTGGGGGAAAACTCTGATTTAGAGGATTTTGATGTATCAACTAATCATTTGAGTGGTGAATTGCCTAAGTATCTTTGTCGAAGGAACAAGCTTCAGCGTCTAATCATATTCGATAATCGATTCTCTGGAACTCTGCCAGATCAATATGGACATTGTGATTCCCTGGGATATGTTAGAATCAAGAACAACCAACTTTATGGGAATGTGCCATCCAAGTTTTGGAGCCTTCCAAAACTTGGTTTTCTTGAAATGGATAACAACAGGTTCCAAGGTTCCATTTCTGAATCCATATCTAATTGCAGGGGGCTTTCAACACTTACTTTACACGGTAACAACTTTTCTGGTAAATTCCCAACAGGAATTTGTAAGCTTGATCAGCTAATTAAGATTGACATAAGCAAGAACATGTTCAATGGTGAAGCTCCCGCATGCCTAACTTGGTTGAAAAAGTTACAGAACCTTCGTATGCAAGAAAACATGTTCACTGGTGAGATGCCTAGCAATGTGAGTTCATGGACTGAGTTAACGGTGTTGAACTTGTCACATAACCGATTCCATGGTTCGATCCCAACAGAACTTGGTGACTTACTGCAGTTAACGTGCCTTGACCTTGCCATGAATTCTCTCACGGGGGAGATTCCAGTAGAGTTGACAAATTTGACACTGAACCAATTCAATGTCTCTGGTAACAAGTTGTATGGGAAGGTTCCTTCAGGTCTCAACCATGAAGTGTACTTAGCAGGTTTAATGGGTAATCCGGGTCTGTGTAGCCCAGTTATCAAAACCCTCCCTTCTTGTTCCAAACACGGACCCTTTTCTCTCATTGCTATAATCCTCTTGGCTGCTTGTGCTGTTCTCATAGTGTCCCTGTTATGGTTCCTAAAGAAAAAGTCACTTCCTAAGCGTTCATTTAAGGTAACAACTTTCCAAATGGTTGGGTTCAATGAACAAGACATAGTCCCATTCTTAACCAGCGAGAACATAATTGGCACAGGAAATTCAGGCCGGGTCTACCGGGTGGGTCTAAAAGCGGGTCAGACAGTGGCGGTAAAGAAACTCTGGGGAGGAACACAAGGACCAGACATGGAATCAGTGTTCAGGTCGGAGACTGAGACATTGGGTAGAATTCGGCATGCTAATATTGTGAAACTGTTGTATAGTTGCAGTGCTGATGACTTCAGGATTCTGGTGTATGAGTACATAGATAATGGGAGCTTAGGTGATGTTTTGCATGAACAAAAATATGGGCAGTTGTTGGATTGGTCTAAGAGGTTCAACATTGCTGTAGGTGCAGCTCAGGGGTTGGCTTACCTACACCATGATTGTGTGCCTGCTATTATTCATAGGGATGTGAAAAGTAACAACATATTGTTGGATTTTGAATTTAAGCCTCTTCTAGCAGACTTTGGGTTGGCTAAGACCTTGCATCATGGGCCTAGTGAGGGAGGCGGTGCCATGTCTAGGGTTGCTGGATCATATGGTTACATTGCTCCAGAGTATGCTTATACATTGAAAGTGAGTGAGAAAAGTGATGTTTATAGTTTTGGTGTGGTGCTGATGGAATTGATCACTGGCAAGAGGCCAAATGACCCTTCCTTTGGTGAGAACAAGGATATAGTGAAGTGGGTCACTGAGACAGCTATATCTTGTTCTGAAGAAGAAAGTGGCAAAATTGGAGGTCACCATTTTAATTTGTCCAAGATAGTAGACCCAAGATTGAACCTGGAAACCAGTGATTATGATGAGGTTGAGAAAGTTCTAACAGGGGCTCTACTTTGCACCTCAGTGTTTCCACTTAAGAGACCCTCAATGAGAAGGGTGGTTGAATTGCTCAAGGACCACAGTGATAGGCACCACTGCACCACATCAAAGTGA 2961 0.4154 MYQFIFNLLLHMLLNFLLLCSNPLPQVVSMSLTRDFQILLQVKNTQLDDKNNNLKEWVPNRDHNPCNFTGITCDARNKSVISINLSEVGVYGNFPFGFCHIHTLQNLSLASNFLGNAIYPHSLLLCSHLQLLNLSDNCFVGALPELSPECDQLRVLDLSNNNFTGDIPGNYCNLLQLEVLILSGNLISGTIPSFLGKLKSLTQLELAFNPLKPGPLPSQLGNLCNLEILYLAKLNLIGDISDSIGNLVSLKHLDLSQNSLSGKIPNNISGLIKLKELYLFQNQLSGELPQGLGNLSNLIDLDLSQNYLTGKLPDTIASLHLFSLNLNDNLLEGEIPEILASNPNLQHLKLFNNSFTGKLPQILGENSDLEDFDVSTNHLSGELPKYLCRRNKLQRLIIFDNRFSGTLPDQYGHCDSLGYVRIKNNQLYGNVPSKFWSLPKLGFLEMDNNRFQGSISESISNCRGLSTLTLHGNNFSGKFPTGICKLDQLIKIDISKNMFNGEAPACLTWLKKLQNLRMQENMFTGEMPSNVSSWTELTVLNLSHNRFHGSIPTELGDLLQLTCLDLAMNSLTGEIPVELTNLTLNQFNVSGNKLYGKVPSGLNHEVYLAGLMGNPGLCSPVIKTLPSCSKHGPFSLIAIILLAACAVLIVSLLWFLKKKSLPKRSFKVTTFQMVGFNEQDIVPFLTSENIIGTGNSGRVYRVGLKAGQTVAVKKLWGGTQGPDMESVFRSETETLGRIRHANIVKLLYSCSADDFRILVYEYIDNGSLGDVLHEQKYGQLLDWSKRFNIAVGAAQGLAYLHHDCVPAIIHRDVKSNNILLDFEFKPLLADFGLAKTLHHGPSEGGGAMSRVAGSYGYIAPEYAYTLKVSEKSDVYSFGVVLMELITGKRPNDPSFGENKDIVKWVTETAISCSEEESGKIGGHHFNLSKIVDPRLNLETSDYDEVEKVLTGALLCTSVFPLKRPSMRRVVELLKDHSDRHHCTTSK 986
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0277 986 Gene3D Ribonuclease Inhibitor 191 290 IPR032675 -
Lal16g0277 986 Pfam Protein kinase domain 687 894 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g0277 986 SMART LRR_typ_2 438 462 IPR003591 -
Lal16g0277 986 SMART LRR_typ_2 271 295 IPR003591 -
Lal16g0277 986 SMART LRR_typ_2 174 198 IPR003591 -
Lal16g0277 986 SMART LRR_typ_2 247 270 IPR003591 -
Lal16g0277 986 SMART LRR_typ_2 534 558 IPR003591 -
Lal16g0277 986 SMART serkin_6 685 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g0277 986 SUPERFAMILY RNI-like 79 403 - -
Lal16g0277 986 SUPERFAMILY L domain-like 319 628 - -
Lal16g0277 986 Gene3D Phosphorylase Kinase; domain 1 679 762 - -
Lal16g0277 986 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE HSL2 18 978 - -
Lal16g0277 986 Gene3D Ribonuclease Inhibitor 301 631 IPR032675 -
Lal16g0277 986 Pfam Leucine rich repeat N-terminal domain 34 74 IPR013210 -
Lal16g0277 986 ProSitePatterns Serine/Threonine protein kinases active-site signature. 808 820 IPR008271 GO:0004672|GO:0006468
Lal16g0277 986 ProSitePatterns Protein kinases ATP-binding region signature. 691 714 IPR017441 GO:0005524
Lal16g0277 986 Pfam Leucine rich repeat 225 284 IPR001611 GO:0005515
Lal16g0277 986 Pfam Leucine rich repeat 152 211 IPR001611 GO:0005515
Lal16g0277 986 Gene3D Transferase(Phosphotransferase) domain 1 763 985 - -
Lal16g0277 986 SUPERFAMILY Protein kinase-like (PK-like) 685 973 IPR011009 -
Lal16g0277 986 Gene3D Ribonuclease Inhibitor 33 190 IPR032675 -
Lal16g0277 986 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 18 978 - -
Lal16g0277 986 ProSiteProfiles Protein kinase domain profile. 685 979 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0277 Lal-Chr16 1653304 1658674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0277 35 976 Receptor kinase-like Gene Family AT5G65710 55.394 0.0 1014
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lal16g0277 Pkinase 6.9e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0277 - - gmx:100813889 1330.47