Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0262 ATGTCAGTTCCAATGGCGGCTTCATTATCGAATTCTCTGATATCCATTCCAAACCCTCACAACAACCTATGTTGCCATTCTTGTCACCGTTTCTATTTCCATTCACAACCACAATCTATTCTCAAATTAAAATCTCTTTCCCCAAAACAATTGCCTGTGTCCATTGATCGAAATAAGAGATGTTCAACTAAATGCAATGTATTCAGTGAAGGGACCGTGGACGAAGAGAGCTACAATTCGATGGAGGATAAGCAATTTGTGCGTTGGTTTCGTGAAGCGTGGCCTTACTTATGGGCCTATCGTGGTGGCACTTTTGTTGTCATTATTTCCGGTGAAGATATAGCTTTCCTTCATCACCTGGGAATCCGGTTTGTTCTTGTTCCGGGGACCCATGTGCAAATAGACAAGCTTTTGAATGAGAGAGGGAGACAGCCTAAGTATGTTGGTAGATATAGAATAACCGATGATGAATCTCTAGCTGCTGCAATGGAAGCTGCTGGGGGGATAAGACTGATGATTGAAGCAAAGCTTTCTCCCGGACCCTCCATATGCAATATGCGTCGACATGGTGACAATAGCCGTTGGCACGAAGTTGGTGTCAGTGTTGCCAGTGGTAACTTTCTTGCTGTCAAGAGAAGAGGGGTTGTCAATGGAATTGATTTTGGGTCAACTGGGGAGGTTAAAAAAGTAGATGCATCTAGAATGCGTGAGAGGCTTGATGGTGGTTGTGTAGTTATTTTAAGCAACTTGGGCTACTCCAGCTCTGGAGAAGTATTAAATTGCAACACATATGAAGTTGCCACAGCTTGTGCCTTGGCTATAGGAGCTGACAAGTTAATATGTATTATAGATGGCCCAATACTTGACGAGAGTGGACGCCTAATTCGTTACTTGCCTCTTCAAGAAGCAGACATGTTAATTCGTAAACGAGCTGCACAAAGTGAAATAGCTGCTAAATATGTGAAAGCCGTTGATGAAGAAGTTCTTAACTCTCTTGAGCATAACCATTTTAATGGGACAGTCCAATCTCCTTCCAATGGAAAACCTTCTACAGGATGGAATAATGTAACCTTTCATAATGGCATTGGTTTTGACAATGGGAATGGCCTAGGGTCTGGTGAGCAAGGATTTGCTATTGGAGGTCAAGAGAGGCTAAGTCGAATGAATGGTTATCTGTCGGAATTGGCAGCTGCAGCCTTTGTTTGTAGAGGTGGTGTTCAAAGAGTTCACTTGTTGGATGGCACTATTAGTGGAGTTTTGTTGTTGGAATTGTTTAAAAGAGATGGGATGGGAACAATGGTGGCTAGTGACCTATATGAAGGCACTCGGATGGCACAGGTAACAGATATTTCTGGAATAAAACAACTTATGCAGCCTTTGGAGGCATATGGCATATTGGTTAAGCGGACTGACGAAGAGCTGCTAAAATCATTGGATAACTTCCTTGTTGTGGAGAGAGAAGGTCAAATAATTGCTTGTGCTGCTCTTTTTCCTTTTTTTGAGGAGAAGTGTGGGGAGGTTGCTGCTATTGCAGTATCTCCTGATTGTCGTGGCCAAGGACAGGGAGACAAGTTGCTTGATTATATAGAGAATAAAGCATCATCTCTTGGATTAAATATGCTTTTCCTGCTTACTACTCGCACAGCAGATTGGTTTGTGAGGCGTGGATTTTCAGAATGCTCAATTGACTGTATTCCTGAAAAGAGGAGGAGAATGATCAATTTGTCCCGCAATTCTAAATATTATATGAAGAGGCTTCCACCAAATAGAAGTGGAATTACTGTTGGTAGAAAAATTATTTCAAATTAG 1809 0.4201 MSVPMAASLSNSLISIPNPHNNLCCHSCHRFYFHSQPQSILKLKSLSPKQLPVSIDRNKRCSTKCNVFSEGTVDEESYNSMEDKQFVRWFREAWPYLWAYRGGTFVVIISGEDIAFLHHLGIRFVLVPGTHVQIDKLLNERGRQPKYVGRYRITDDESLAAAMEAAGGIRLMIEAKLSPGPSICNMRRHGDNSRWHEVGVSVASGNFLAVKRRGVVNGIDFGSTGEVKKVDASRMRERLDGGCVVILSNLGYSSSGEVLNCNTYEVATACALAIGADKLICIIDGPILDESGRLIRYLPLQEADMLIRKRAAQSEIAAKYVKAVDEEVLNSLEHNHFNGTVQSPSNGKPSTGWNNVTFHNGIGFDNGNGLGSGEQGFAIGGQERLSRMNGYLSELAAAAFVCRGGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRMAQVTDISGIKQLMQPLEAYGILVKRTDEELLKSLDNFLVVEREGQIIACAALFPFFEEKCGEVAAIAVSPDCRGQGQGDKLLDYIENKASSLGLNMLFLLTTRTADWFVRRGFSECSIDCIPEKRRRMINLSRNSKYYMKRLPPNRSGITVGRKIISN 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0262 602 Pfam Amino acid kinase family 113 322 IPR001048 -
Lal16g0262 602 TIGRFAM N-Ac-Glu-synth: amino-acid N-acetyltransferase 394 586 IPR010167 GO:0004042|GO:0005737|GO:0006526
Lal16g0262 602 Gene3D - 84 439 IPR036393 -
Lal16g0262 602 CDD AAK_NAGS-ABP 85 434 IPR033719 -
Lal16g0262 602 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 443 587 IPR016181 -
Lal16g0262 602 PANTHER AMINO-ACID ACETYLTRANSFERASE 49 593 IPR010167 GO:0004042|GO:0005737|GO:0006526
Lal16g0262 602 Hamap Amino-acid acetyltransferase [argA]. 81 586 IPR010167 GO:0004042|GO:0005737|GO:0006526
Lal16g0262 602 Gene3D - 440 586 - -
Lal16g0262 602 CDD NAT_SF 481 543 - -
Lal16g0262 602 Pfam Acetyltransferase (GNAT) family 480 545 IPR000182 GO:0016407
Lal16g0262 602 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 440 588 IPR000182 GO:0016407
Lal16g0262 602 SUPERFAMILY Carbamate kinase-like 83 319 IPR036393 -
Lal16g0262 602 SUPERFAMILY Carbamate kinase-like 388 436 IPR036393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0262 Lal-Chr16 1570742 1576629 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lal16g0262 AA_kinase 2.3e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0262 K14682 - gmx:100800925 888.256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0262 16 1570742 1576629 Lal15g0198 15 1360302 1367008 LSH
Lal16g0262 16 1570742 1576629 Lal23g1287 23 13912484 13918400 LSH