Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0258 ATGGATACCTTGTTTAGGCTTGTCAGTTTTCAATATCAACAAACCGATAATCAATCCCTCAACTCCACCACAAGCAGAACCACAACATCTAGTAGTTCTAGATCCTCTAGACAACAACACCAACACCAACACCAACACCAAAACTATCACTTCCAACAAGATCAAGACGAAGAATGCTTCAACTTTTTCATGGATGATGAAGACCTTTCCTCGTCTTCTTCTAAGCACTATTATCCTTACCAACCCCACTACCCTCCTTCCACCACCACCACCACCCTCACCCCAACCCCTGATAACTTCTCCTTCTCACCCTCCCGCACTGACTTCAATTTCGAATTCTCAGGCAAGTGGGCCAACGACATCCTCCTCGAAACGGCACGTGCCATTGCTGAGAAGAACAGCGCACGTGTCCAACAACTCATGTGGATGCTCAACGAACTAAGCTCCCCTTATGGTGATACAGATCAGAAACTTGCTTCCTATTTCCTCCAAGCTTTGTTCAGTCGCATGACCGAAGCGGGAGACAGAACCTACCGTACTTTAACCTCCGCATCGGAGAAAACATGTTCATTTGAATCAACAAGAAAAACTGTTTTGAAGTTCCAAGAAGTTAGCCCTTGGACAACCTTTGGACACGTTGCGTGTAATGGCGCAATCTTAGAAGCCTTAGAAGGAGAGCCAAAGTTGCACATAATTGATATTAGTAACACCTATTGCACCCAATGGCCTACTCTCTTTGAAGCATTGGCCACTCGAAACGACGATACTCCGTACCTTCGGTTAACAACGGTTGTTACTACCAGGCTTGGTAGCTCTATCGCGGCGGTGCAAAAGGTCATGAAGGAAATAGGCACTAGAATGGAGAAATTCGCGAGGCTCATGGGTGTTCCTTTTAAATTCAACGTGATTCATCATGCTGGTGATCTTTCTACTTTGGATTTGAGTGATTTGAATATTAAGGACGATGAAGCGTTGGCGATTAACTGCGTTAACGCTTTGCATTCGATCACAGGCGTTGGTGACGCCCGTGACGTGTTGATATCTTCGTTAAGGAGTTTACAACCGAGGATAATCACGGTAGTAGAAGAGGAAGCTGATTTGGACGTTGGATTCGATGGATTTGAGTTTGTGAAGGGTTTCCAAGAATGTTTGAGATGGTTTAGGGTTTACTTTGAAGCTTTAGATGAAAGCTTTGCGAGAACGAGCAACGAGCGTTTGATGCTCGAACGTGAGGCAGGGAGAGCGGTGTTTGACTTGGTGGCTTGTTCTCCGTCGGAGTCGGTGGAGCGTCGTGAGACAGCAGCGCGGTGGTCGCAGCGTCTGCATGAGGGTGGCTTAAATACGGTGCCGTTTAGTGATGAGGTTTGCGATGATGTTAGAGCATTGTTGAGGAGGTATAAGGAAGGATGGTCAATGACACAGTGCTCCGACACCGGAATATTCTTGTCGTGGAAGGAGCAGGTGGTGGTGTGGGCCAGTACATGGAGGCCTTGA 1494 0.4685 MDTLFRLVSFQYQQTDNQSLNSTTSRTTTSSSSRSSRQQHQHQHQHQNYHFQQDQDEECFNFFMDDEDLSSSSSKHYYPYQPHYPPSTTTTTLTPTPDNFSFSPSRTDFNFEFSGKWANDILLETARAIAEKNSARVQQLMWMLNELSSPYGDTDQKLASYFLQALFSRMTEAGDRTYRTLTSASEKTCSFESTRKTVLKFQEVSPWTTFGHVACNGAILEALEGEPKLHIIDISNTYCTQWPTLFEALATRNDDTPYLRLTTVVTTRLGSSIAAVQKVMKEIGTRMEKFARLMGVPFKFNVIHHAGDLSTLDLSDLNIKDDEALAINCVNALHSITGVGDARDVLISSLRSLQPRIITVVEEEADLDVGFDGFEFVKGFQECLRWFRVYFEALDESFARTSNERLMLEREAGRAVFDLVACSPSESVERRETAARWSQRLHEGGLNTVPFSDEVCDDVRALLRRYKEGWSMTQCSDTGIFLSWKEQVVVWASTWRP 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0258 497 MobiDBLite consensus disorder prediction 16 38 - -
Lal16g0258 497 Pfam GRAS domain family 120 496 IPR005202 -
Lal16g0258 497 ProSiteProfiles GRAS family profile. 109 496 IPR005202 -
Lal16g0258 497 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 496 IPR005202 -
Lal16g0258 497 PANTHER PROTEIN SHORT-ROOT 1 496 IPR030019 GO:0003700|GO:0005634|GO:0008356|GO:0009956|GO:0043565|GO:0048366
Lal16g0258 497 MobiDBLite consensus disorder prediction 74 94 - -
Lal16g0258 497 MobiDBLite consensus disorder prediction 16 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0258 Lal-Chr16 1549319 1550812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0258 1 497 GRAS Transcription Factor Family AT4G37650 59.777 0.0 590
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lal16g0258 GRAS 1e-102 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0258 - - jre:108988543 703.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0258 16 1549319 1550812 Lal23g1292 23 13938825 13940330 LSH