Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lal16g0257 | ATGAAGTTCAACCCAAGGGTTTCAAGCAGCCGCCGCAAGAGCCGAAAGGCTCATTTCACGGCGCCGTCAAGCGTCCGTCGCGTTCTGATGAGTGCTCCTCTCTCAGGCGACCTTAGATCCAAGTACAACGTGCGGTCTGTGCCAGTGCGTAAGGAAGATGAGGTTCAAGTCGTAAGGGGAACCTACAAAGGGAGAGAAGGAAAGGTTGTACAAGTTTATCGTCGCAAATGGGTTATCCACATTGAACGTATAACCCGAGAGAAGGTTAACGGTTCAACCGTTAACGTTGGGGTCCACCCTTCGAAAGTTGTTATCACAAAGCTCCGTTTGGATAAGGACCGAAAATCGTTGTTGGATCGTAAGGCGAAGGGTCGTGCCGCTGCTGATAAGGAAAAAGGTACTAAGTTCGCTCCAGAGGATGTTATGCAAACTATCGATTAG | 441 | 0.4943 | MKFNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSGDLRSKYNVRSVPVRKEDEVQVVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGSTVNVGVHPSKVVITKLRLDKDRKSLLDRKAKGRAAADKEKGTKFAPEDVMQTID | 146 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lal16g0257 | 146 | ProSitePatterns | Ribosomal protein L24 signature. | 52 | 69 | IPR005825 | GO:0003735|GO:0005840|GO:0006412 | |
Lal16g0257 | 146 | MobiDBLite | consensus disorder prediction | 120 | 146 | - | - | |
Lal16g0257 | 146 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Lal16g0257 | 146 | TIGRFAM | rplX_A_E: ribosomal protein uL24 | 8 | 122 | IPR005756 | GO:0003735|GO:0006412|GO:0015934 | |
Lal16g0257 | 146 | PANTHER | 60S RIBOSOMAL PROTEIN L26-1 | 1 | 146 | - | - | |
Lal16g0257 | 146 | Gene3D | - | 1 | 143 | IPR014722 | - | |
Lal16g0257 | 146 | MobiDBLite | consensus disorder prediction | 120 | 137 | - | - | |
Lal16g0257 | 146 | CDD | KOW_RPL26 | 53 | 105 | IPR041988 | GO:0003723 | |
Lal16g0257 | 146 | PANTHER | 60S RIBOSOMAL PROTEIN L26 FAMILY MEMBER | 1 | 146 | IPR005756 | GO:0003735|GO:0006412|GO:0015934 | |
Lal16g0257 | 146 | Pfam | KOW motif | 53 | 82 | IPR005824 | - | |
Lal16g0257 | 146 | Hamap | 50S ribosomal protein L24 [rplX]. | 9 | 121 | IPR005756 | GO:0003735|GO:0006412|GO:0015934 | |
Lal16g0257 | 146 | SMART | kow_9 | 48 | 75 | IPR005824 | - | |
Lal16g0257 | 146 | Pfam | Ribosomal proteins L26 eukaryotic, L24P archaeal | 8 | 121 | IPR005756 | GO:0003735|GO:0006412|GO:0015934 | |
Lal16g0257 | 146 | SUPERFAMILY | Translation proteins SH3-like domain | 8 | 125 | IPR008991 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lal16g0257 | Lal-Chr16 | 1546769 | 1547209 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lal16g0257 | 1 | 146 | Cytoplasmic Ribosomal Protein Gene Family | AT3G49910 | 85.616 | 1.04e-91 | 260 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lal16g0257 | K02898 | - | gmx:100788996 | 243.047 |