Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0255 ATGATTTCTTTGTCCAGTCTTATGTGTGAAGAAGGTGGAGCTAGCTTCCTTGTTGAATATGATGAAAACACTAGCATTGATTCACTTTATAACCCATGTTTCATTTTGGATGATGAAGAGAAATACATTGAATATTTGTTCACACAAGAAATGGGGTTCGTATCAGAGAGTTGTCCTGCTTTATCATCAAATCATGATTGCTCAAACAGATTCTGGTTGAGAAGTGCTCGTCTTGATGCTATCGATTGGATTTTCAATACACAGGCGAAATTTGGATTCAAAGTTCACACAGCTTATTTATCAATGACTTACTTTGATCAATTCCTTTCAAAGCGATCCATCGATGAATCCAAACCTTGGGCTATTCAGTTATTATCAGTAGCATGTTTATCCCTAGCAGCAAAGATGGAAGAGCAAAATGTGCCTTCTCTATCTGAGTATCCATCAGAAGAGTATCTGTTTGAGACAAGAGTGATTAAGAACATGGAGCTTATGATTTTGAGTACATTGGAATGGAAAATGGGATCAGCAACACCTTTTCCTTATCTTCATTACTTTGTCACCAAGTTCTGCCCCAGATCCAGACCAGAAACTATAATCACAAAAGCCATTGATTATATTGTGGCAATGGTCAAAGATATTAATCTGATGGATCAACGGCCATCAATTATTGCTTCAGCGGCTGTATTGGCAGCTTTTGATGCTACATTAACAAGAAATGCCATGGACCATATGATAAGTGCAATCTCATCATGGGGAAATATAGAAAGTGGGCATGTATTTTCATGTTACAATCTGATACAGGAGAAGAAGAGAAACAAAGTTAAGACCCCTTCCTCGATTCTATTTTCCACCCATTCAACATCCACGTGTGTTGTTGAGAACCCACTTGACACTTCTTCAGGAACCAAGAGAAAACTTCCTTTTGACAAAAGCTAA 939 0.3781 MISLSSLMCEEGGASFLVEYDENTSIDSLYNPCFILDDEEKYIEYLFTQEMGFVSESCPALSSNHDCSNRFWLRSARLDAIDWIFNTQAKFGFKVHTAYLSMTYFDQFLSKRSIDESKPWAIQLLSVACLSLAAKMEEQNVPSLSEYPSEEYLFETRVIKNMELMILSTLEWKMGSATPFPYLHYFVTKFCPRSRPETIITKAIDYIVAMVKDINLMDQRPSIIASAAVLAAFDATLTRNAMDHMISAISSWGNIESGHVFSCYNLIQEKKRNKVKTPSSILFSTHSTSTCVVENPLDTSSGTKRKLPFDKS 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0255 312 Gene3D - 74 175 - -
Lal16g0255 312 Gene3D - 176 265 - -
Lal16g0255 312 PANTHER CYCLINS 65 283 IPR039361 -
Lal16g0255 312 CDD CYCLIN 77 167 IPR013763 -
Lal16g0255 312 SUPERFAMILY Cyclin-like 31 174 IPR036915 -
Lal16g0255 312 SMART cyclin_7 82 168 IPR013763 -
Lal16g0255 312 Pfam Cyclin, C-terminal domain 178 274 IPR004367 -
Lal16g0255 312 Pfam Cyclin, N-terminal domain 73 174 IPR006671 -
Lal16g0255 312 PANTHER CYCLIN-D5-1 65 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0255 Lal-Chr16 1531804 1541709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0255 3 257 Core Cell Cycle Gene Families AT4G37630 35.075 4.11e-47 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0255 K18811 - gmx:100798140 453.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0255 16 1531804 1541709 Lal15g0193 15 1329221 1331041 LSH