Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0252 ATGAGTTTGGATAGTGTAGTTGTGAGAGAGTTCGACCACAATAAAGATAGAAGGAGAGTTGAAGAGGTTGAAAGAATATGCGAAGTTGGACCAAGTGGCAAGCTTTCACTCTTCACCGACCTCCTAGGTGACCCTATTTGTAGGGTACGCCACTCACCTGCTTTTCTCATGCTGGTGGCTGAGATAGGTGATGAAATAATAGGAATGATAAGGGGCTGCATCAAAACTGTGACATGTGGAAAGAAACTCTCAAGAAATGGAAAGTACAAGCACTTAACTACAACTACCAATAATAACAACAGTTGCAATGACACTGTCCAATCTACTACCCTCAAACACGTACCCGTATACACCAAAGTCGCCTACATATTAGGCTTGCGCGTTTCACCTTCTCACCGGAGAATGGGAGTAGGGTTGAAACTAGTGCACAGAATGGAGTCATGGTTCAATGATAATGGAGTTGAGTACTCGTACATGGCAACTGAAAACGACAACATAGCTTCCGTGAAGCTCTTTACTGATAACTGTGGATACACTATGTTTCGTACACCTTCAATCCTTGTTAACCCAGTTTTTGCTCACAGAACCAACGTGTCCCCAAAAGTTACCATCATCAAACTCAACACAATTGACGCTGAATCACTTTACCGCGCTCGATTTGCCACCACTGAGTTCTTCCCTCGCGACATTGACTCAATCCTCAATAATAAACTTTCTCTCGGAACTTTCCTTGCTGTGCCACATGGCTCTTATACGCCAGACACTTGGCCTGGTTCAAGTTTTTTCCTATCCCACGCGCCTAAGTCTTGGGCCCTACTCAGTGTTTGGAACTGTAAAGATGTTTTCACGCTCGAAGTGCGCGGCGCGTCACGAACAAAGCGTGCTCTCGCTAGAACGACAAGATTACTGGATAGGACTTTACCGTTTCTTCAGTTGCCGTCGATTCCAGATTTTTTTAAACCATTTGGGTTTCACTTTCTGTATGGGTTGGGTGGTGAAGGACCTAAAGCGGTGAATATGGTGAAGGCATTATGTGGGTTCGCGCACAATTTGGCTAAGGAACATGGTTGTGGTGTGGTGGCTACTGAAGTATCTTGTCGTGAACCGTTGAGGTTTGGGATACCGCACTGGAAGATGCTATCTTGCGCTGATGATTTATGGTGTATAAAGAGGCTTGGGGAAGATTACAGTGATGGCTCTATTGGTGACTGGACCAAATCTCCACCTGGAATTTCCATATTTGTTGACCCTAGAGACTTCTAA 1263 0.4481 MSLDSVVVREFDHNKDRRRVEEVERICEVGPSGKLSLFTDLLGDPICRVRHSPAFLMLVAEIGDEIIGMIRGCIKTVTCGKKLSRNGKYKHLTTTTNNNNSCNDTVQSTTLKHVPVYTKVAYILGLRVSPSHRRMGVGLKLVHRMESWFNDNGVEYSYMATENDNIASVKLFTDNCGYTMFRTPSILVNPVFAHRTNVSPKVTIIKLNTIDAESLYRARFATTEFFPRDIDSILNNKLSLGTFLAVPHGSYTPDTWPGSSFFLSHAPKSWALLSVWNCKDVFTLEVRGASRTKRALARTTRLLDRTLPFLQLPSIPDFFKPFGFHFLYGLGGEGPKAVNMVKALCGFAHNLAKEHGCGVVATEVSCREPLRFGIPHWKMLSCADDLWCIKRLGEDYSDGSIGDWTKSPPGISIFVDPRDF 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0252 420 CDD NAT_SF 57 156 - -
Lal16g0252 420 Gene3D - 37 183 - -
Lal16g0252 420 Pfam Acetyltransferase (GNAT) family 50 178 IPR000182 GO:0016407
Lal16g0252 420 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 6 198 IPR000182 GO:0016407
Lal16g0252 420 PANTHER N-ACETYLTRANSFERASE HLS1-LIKE-RELATED 6 420 - -
Lal16g0252 420 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 49 179 IPR016181 -
Lal16g0252 420 PANTHER N-ACETYLTRANSFERASE 6 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0252 Lal-Chr16 1507699 1509923 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lal16g0252 Acetyltransf_1 2.2e-15 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0252 - - lang:109348839 790.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0252 16 1507699 1509923 Lal23g0130 23 1254762 1256838 LSH
Lal16g0252 16 1507699 1509923 Lal16g1326 16 9431126 9434888 PCT
Lal16g0252 16 1507699 1509923 Lal23g0130 23 1254762 1256838 PCT
Lal16g1326 16 9431126 9434888 Lal16g0252 16 1507699 1509923 PCT
Lal23g0130 23 1254762 1256838 Lal16g0252 16 1507699 1509923 PCT