Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0224 ATGGCGTCGATTCCGCCGGCTCCCGCCTCTTCTTCTAGATCAGAACCTCTCATCGACCCCTCTACACAAAAAGTGGATGATGCAAGTCCCACTGTTAAAGTCGTGTTACTGGTTATTGATTCATTAAAGAAACATGTTGCTGCTGAGCGGGTTGTTTCCGTAAAGAAAAGAATGGAAGAAAATAGACAGAAGTTGGTTGGTGTCACAAACCATCTCTGCAATATGTCTATGGACAAAAGGACCTACAACGTTATTGATTTACATGGAAGTCTGGACCTACTGACAAAGAGGCAAAAAGAAGCAATTGATATGCATAATGGTGTTCATGAAAGTCCTGGTGATAAGGAGAGCAATGGCTATCTTGAAGATAACCATGGTTCTACAGCAGTTCTTCTAGGATCTAATGTTGCTGTAAAGAATGCTGTTCGCCCTATCAAGTTACCTGCAGTGACAAGATTACCTCCTTACACCACCTGGATTTTTCTAGACAGGAATCAAAGAATGACTGAGGATCAGTCAGTGGTGGGTCGAAGACGAATTTATTATGACCAAAATGGTGGAGAAGCACTTATTTGCAGTGATAGTGAGGAGGAAGTGATGGAGGATGAAGAGGAGAAAAGAGAATTTGTAGAGTCAGAAGATTATATACTTCGCATGACTATCAAAGAAATTGGTTTATCTGATATTGTTCTGGAGTCGCTGGCACAATGTTTTTCTAGAACCACCAGTGAAATTAAGGCAAGATATGAAACTTTTAGTAATGAAGACAATGCAGGTGGGGGTTCCAAGAATGGAAATACTGAAGATAATTCTCAACATGGAAATTCTTTTCTGGAAAAGGATCTTGAAGTAGCTCTTGACTCTTTTGACAACCTTTTTTGCCGACGATGTCTTGTTTTCGATTGCAGGTTACACGGATGTTCACAGGATCTTGTCTCTCCTGTTGATAAGCAACCTATGTGGATCCTTCCTGATACTGAAAGTGCACCTTGTGGGCCAAATTGTTTTCAATTGGTACTTAAATCAGAAAGGTTTGCTAAAGCTTCCTCTTCTGCCCATGCTGGTGCAGAAGAGAAATGCTCTGGTGGTTCTTCATCAAGGAAGAAGTCTTCTGCTAGAAGGCAGATGAAATGCAGCCAAAGTGAAGGTGCTTCATCTAATGCAAAGAACATTTCTGAAAGTAGTGACTCAGAGAATGGTCCCGGGAGGGACCCTGTTTCAGCTTCCCATTTGGCACCGCCAAAAACTAAACCAGTGGGGAGAGGTGGAATCGGTAAGAGGAACAGTAAACGAGTGGCAGAACGTGTTCTAGTTTGCATGCAGAAGCGGCAGAAGAAAACGGTGGCTTCTGATTCTGGTTCCATCGGTGAAGCTCTTGACCTACCATCGAATGATATGGTTACTACTGACTCGCCTGTCATGAGCAGTGAAGACAACATGAGGAAGGAAGGGTTAGTGGATGAGAACATTTGTAAACAAGAACTCACAGATAATAAATCTTGGAGAGCTCTTGAAAAAGGGCTTCTGGAGAAAGGAATGGAGATTTTTGGTAGAAACAGCTGCTTAATAGCCAGGAATCTCTTAAATGGTGTAAAGACATGTTGGGATGTATTCCAACACATTAATTGTGAAGAAGGAAAGATGTCAGGTCCTGGTGGTGATGCTGCAAATTCTTTCGTGGATGGCTATTCCAAGGGTAATAATGACGTGAGGCGAAGGTCAAGATTTTTACGTAGAAGAGGAAGAGTTCGTCGATTGAAGTATACCTGGAAATCTGCTGCCTATCATTCAATTAGGAAAAGGATTACTGATAAGAAGGATCAGCCCTGCCGGCAGTACAATCCTTGTGGTTGCCTAACAGCTTGTGGAAAGCAGTGTCCCTGTCTTTTAAATGGAACCTGCTGTGAGAAGTATTGTGGGTGTCCCAAGACTTGCAAGAATCGATTTCGTGGCTGTCATTGTGCTAAGAGTCAATGCCGAAGTCGTCAATGTCCATGCTTTGCGGCAGATAGAGAATGTGATCCAGATGTTTGTAGGAATTGTTGGGTTAGTTGCGGTGATGGTACTCTTGGAATTCCTAGTCAAAGAGGTGATAATTATGAATGTAGGAACATGAAACTTCTTCTTAAACAACAGCAGAGGGTTCTTCTTGGAAGATCTGATGTATCTGGCTGGGGAGCCTTCTTAAAGTTTGTTCTTGATGCTTACCGTAAAGGTGACAAATTGAAGTTTGCGAATCATTCTCCTGATCCCAATTGCTATGCAAAGGTTATCATGGTTGCTGGGGATCATAGGGTGGGCATTTTCGCCAAGGAACGGATCGGTGCTGGGGAGGAACTGTTTTATGATTATCGATATGAGCCCGACAGAGCTCCTGCTTGGGCCCGAAAGCCAGAGGCATCTGGATCAAAAAAAGATGATGGTGCCCCCTCAAATGGTCGTGCAAAGAAGCTTGCTTAG 2460 0.4305 MASIPPAPASSSRSEPLIDPSTQKVDDASPTVKVVLLVIDSLKKHVAAERVVSVKKRMEENRQKLVGVTNHLCNMSMDKRTYNVIDLHGSLDLLTKRQKEAIDMHNGVHESPGDKESNGYLEDNHGSTAVLLGSNVAVKNAVRPIKLPAVTRLPPYTTWIFLDRNQRMTEDQSVVGRRRIYYDQNGGEALICSDSEEEVMEDEEEKREFVESEDYILRMTIKEIGLSDIVLESLAQCFSRTTSEIKARYETFSNEDNAGGGSKNGNTEDNSQHGNSFLEKDLEVALDSFDNLFCRRCLVFDCRLHGCSQDLVSPVDKQPMWILPDTESAPCGPNCFQLVLKSERFAKASSSAHAGAEEKCSGGSSSRKKSSARRQMKCSQSEGASSNAKNISESSDSENGPGRDPVSASHLAPPKTKPVGRGGIGKRNSKRVAERVLVCMQKRQKKTVASDSGSIGEALDLPSNDMVTTDSPVMSSEDNMRKEGLVDENICKQELTDNKSWRALEKGLLEKGMEIFGRNSCLIARNLLNGVKTCWDVFQHINCEEGKMSGPGGDAANSFVDGYSKGNNDVRRRSRFLRRRGRVRRLKYTWKSAAYHSIRKRITDKKDQPCRQYNPCGCLTACGKQCPCLLNGTCCEKYCGCPKTCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVSCGDGTLGIPSQRGDNYECRNMKLLLKQQQRVLLGRSDVSGWGAFLKFVLDAYRKGDKLKFANHSPDPNCYAKVIMVAGDHRVGIFAKERIGAGEELFYDYRYEPDRAPAWARKPEASGSKKDDGAPSNGRAKKLA 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0224 819 MobiDBLite consensus disorder prediction 351 427 - -
Lal16g0224 819 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 9 819 IPR025778 GO:0031519
Lal16g0224 819 MobiDBLite consensus disorder prediction 1 25 - -
Lal16g0224 819 Pfam CXC domain 651 682 IPR041355 -
Lal16g0224 819 SMART sant 497 547 IPR001005 -
Lal16g0224 819 SMART sant 205 255 IPR001005 -
Lal16g0224 819 MobiDBLite consensus disorder prediction 793 812 - -
Lal16g0224 819 Gene3D SET domain 730 791 IPR046341 -
Lal16g0224 819 ProSiteProfiles SET domain profile. 650 785 IPR001214 GO:0005515
Lal16g0224 819 SMART set_7 713 791 IPR001214 GO:0005515
Lal16g0224 819 MobiDBLite consensus disorder prediction 252 274 - -
Lal16g0224 819 SMART CXC_2 647 684 IPR033467 -
Lal16g0224 819 MobiDBLite consensus disorder prediction 376 402 - -
Lal16g0224 819 ProSiteProfiles CXC domain profile. 599 698 IPR026489 -
Lal16g0224 819 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 19 456 - -
Lal16g0224 819 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 730 817 - -
Lal16g0224 819 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 467 730 - -
Lal16g0224 819 SUPERFAMILY SET domain 587 790 IPR046341 -
Lal16g0224 819 Coils Coil 193 213 - -
Lal16g0224 819 MobiDBLite consensus disorder prediction 255 273 - -
Lal16g0224 819 MobiDBLite consensus disorder prediction 793 819 - -
Lal16g0224 819 Pfam SET domain 731 784 IPR001214 GO:0005515
Lal16g0224 819 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 730 817 IPR045318 GO:0006338|GO:0018024
Lal16g0224 819 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 467 730 IPR045318 GO:0006338|GO:0018024
Lal16g0224 819 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 19 456 IPR045318 GO:0006338|GO:0018024
Lal16g0224 819 MobiDBLite consensus disorder prediction 448 467 - -
Lal16g0224 819 Gene3D SET domain 613 729 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0224 Lal-Chr16 1339040 1348638 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lal16g0224 SET 1.8e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0224 - K11430 gmx:100809840 1364.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0224 16 1339040 1348638 Lal15g0172 15 1208185 1216513 LSH
Lal16g0224 16 1339040 1348638 Lal23g0193 23 1741461 1751258 LSH