Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0209 ATGCGTTGGTTTTCAACTCTTATCTTCTCCCCTTCTTCCTCATCTTCTTCCTCTGCCCATTCTTCTTCCTCCGACGCTGCCACCCCTACACGTGGTTTATGGGTTTTCTGGTCCGGGAAGAGATCGAAAAGACCCAGGAAGCTTCACCATGAAACCGTCGACGATATCGTCGTTACTCATCCTACGTCTTTGTCTCGTTCTTCTACAAGTAGTTTTGACCGTTGCTATAACCGTTCCACTTCGGTTGCGCCTCAGCCGTTGCCCTTGCCGGAATTGGTCTCCTCCGCCATGCTACGCAACAACAATAGAGACGCTGATAGCCGTTTGCCGTCACCTAAATATGCAGTTGGCTCCACCTCCGTTTCCAAAGGCACCCAAGTTGATGGTGCCGTTGACGCTGTCTCCTCCACTGGTTTTCGCATGCGCAGTGAATCTTTGGTGCTTCTTTCTGACCACAGAGTTTGTTTAACATTTTATGAGTCCAGTGTTTTTGCTAGCCAAACAAAGAATAAAGAGCAAGTAGAAACAAGGACACCTGGGATAGCACCTCAAGACACAAATGGTTCAGCAAGCACGCGATCAGATTCGAACTTTTGGATTAGTGTCCCAGCAAGGAGTGTTCCAAGTAGTCCTTTTGGAAGTCCCACAATCAAACCACATTTAACAAGAAACGAAGACTTTGTGCCATATCATTATGTGACACCAAAAACAAATCAATTCTGGTCTGCACCAGAAATGCCCAAATATGAAACACTAGCAGGGTTGCCACTTCCTGCATTCTTTGATTTATCTTCATTAGGCAGCACTATTAATAATAATAATAGTTCATATTCTCCACATCAAAGTCCAAGGGGAACAAGTCCATGCCAACAACAACACCCTAAAAGCCCATCAACAAGGTCTTCTTCACCCATGCCCCGTCGTGAAAATATTGCTCCTCTAACTGTTCACCCCTTACCCTTGCCTCCTTGGGCTGGGGCTGGGGCTGGCTCAGCCTTACCTTCACCATCTTCTTCCTTTTCTCAACCTGGCACTAAGACAGAACCATTGTCAATGAAATTCAAATGGCAAAAAGGGAAACTCATTGGCCGAGGCACTTTTGGAAGTGTTTATGTTGCCACCAATAGAGAAAATGGAGCATTGTGTGCAATGAAGGAAGCAGAAATATTTTCTGATGATCCAAAATCTGCAGAGTGTATAAAGCAGTTAGAGCAGGAAATTAAAGTCCTTAGCCATCTGAAACATCCAAACATTGTGCAGTATTATGGTAGTGAAATAGTTGAAGACAAGTTCTATATTTTTTTGGAATATATCCATCCTGGTTCAATAAATAAATATGTCCGCGATCACTGTGGTGCGATAACAGAATCTGTTGTTCGAAGTTTCACTCGCCATATTCTTTCAGGGCTGGCTTACCTGCATAGTAAAAAAACTGTTCATAGGGACATCAAGGGAGCTAACTTGCTTGTTGATTCTGCTGGAGTTGTTAAACTTGCAGATTTTGGCATGGCCAAGCATCTAACTGGACATTCAGCTGATCTTTCTCTGAAGGGAAGTCCATATTGGATGGCCCCAGAGCTTATGCAAGCAGTTATGCAAAAGGATAACAGCTCTGATCTAGCTTTCGCTGTTGATATTTGGAGTTTGGGTTGTACAATTATTGAAATGTTCACAGGGAAGCCTCCTTGGAGCGAGTATGAAGGAGCCGCAGCTATGTTTAAGGTTATGAAGGATACCCCTCCTATACCTGAAACATTGTCACCAGAGGGTAAAGATTTCCTGAGGCTCTGCTTTAAAAGAAATCCAGCCGAGCGCCCAACTGCTTCAATGTTGCTAGATCATCGATTTTTGAAGAACAACTTGCAACAGCAGGATATTTCATCTGAGAGTCCTCTAGTTTGCTCTCAACTTTATTATAATTTCTATGACACCACTTGTCCAAGCCTGACCAGAATTGTTCGATCCAATGTCTTATCAGCTATGGCTAATGAGACAAGGATTGCTGCTTCTCTCTTGCGCCTTCATTTCCATGATTGTTTCGTCAATGGATGTGATGGGTCAGTACTACTTGATGATACAAGCACCCTAAAGGGTGAGAAAAATGCACGGCCGAATCAAAATTCAATCAGAGGATTTGAAGTCATTGACAAAATCAAATCTGCCTTAGAGGTGGCATGTCCATCCACAGTGTCATGTGCTGATATACTAGCTCTAGCAGCCAGAGAAGCTGTTAATTTTAGTAGAGGCCCATTTTGGTCAGTACCTCTTGGTCGTAGAGATGGCACAACAGCAAGTGCTCACACCTTTGGCTTTGCTCAATGCTTTACATTCAAGCCAAGGCTCTTTAACTTTGGTGGCTCTGGTAAATCTGATCCATCACTAGATACTTCACTCCTACAAAATTTGCAAAAAGTGTGCCCAAATGAAGATGATTCTGATACCAATTTGGCAGCCTTGGATCCAATCACTACCAACACATTTGATAACACGTATTACAAAAATATTATGAACAATGCTGGGCTACTTCAATCAGACCAAGGTCTTTTAGGAGACAACAGAACAGCTTCATTTGTGAACAACTATAGCAAGTTGCCTCTTTTGTTTTTCAGAGACTTTGCAGTATCTGTGGAGAAAATGGGACGCATAGGTGTACTTACAGGACAACAAGGGCAAATCAGAAAAAACTGTAGGATGGTGAACTAG 2703 0.431 MRWFSTLIFSPSSSSSSSAHSSSSDAATPTRGLWVFWSGKRSKRPRKLHHETVDDIVVTHPTSLSRSSTSSFDRCYNRSTSVAPQPLPLPELVSSAMLRNNNRDADSRLPSPKYAVGSTSVSKGTQVDGAVDAVSSTGFRMRSESLVLLSDHRVCLTFYESSVFASQTKNKEQVETRTPGIAPQDTNGSASTRSDSNFWISVPARSVPSSPFGSPTIKPHLTRNEDFVPYHYVTPKTNQFWSAPEMPKYETLAGLPLPAFFDLSSLGSTINNNNSSYSPHQSPRGTSPCQQQHPKSPSTRSSSPMPRRENIAPLTVHPLPLPPWAGAGAGSALPSPSSSFSQPGTKTEPLSMKFKWQKGKLIGRGTFGSVYVATNRENGALCAMKEAEIFSDDPKSAECIKQLEQEIKVLSHLKHPNIVQYYGSEIVEDKFYIFLEYIHPGSINKYVRDHCGAITESVVRSFTRHILSGLAYLHSKKTVHRDIKGANLLVDSAGVVKLADFGMAKHLTGHSADLSLKGSPYWMAPELMQAVMQKDNSSDLAFAVDIWSLGCTIIEMFTGKPPWSEYEGAAAMFKVMKDTPPIPETLSPEGKDFLRLCFKRNPAERPTASMLLDHRFLKNNLQQQDISSESPLVCSQLYYNFYDTTCPSLTRIVRSNVLSAMANETRIAASLLRLHFHDCFVNGCDGSVLLDDTSTLKGEKNARPNQNSIRGFEVIDKIKSALEVACPSTVSCADILALAAREAVNFSRGPFWSVPLGRRDGTTASAHTFGFAQCFTFKPRLFNFGGSGKSDPSLDTSLLQNLQKVCPNEDDSDTNLAALDPITTNTFDNTYYKNIMNNAGLLQSDQGLLGDNRTASFVNNYSKLPLLFFRDFAVSVEKMGRIGVLTGQQGQIRKNCRMVN 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0209 900 Gene3D - 639 767 - -
Lal16g0209 900 Gene3D - 880 900 - -
Lal16g0209 900 MobiDBLite consensus disorder prediction 1 27 - -
Lal16g0209 900 MobiDBLite consensus disorder prediction 168 194 - -
Lal16g0209 900 CDD secretory_peroxidase 636 899 IPR033905 GO:0004601|GO:0042744
Lal16g0209 900 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 5 1 630 - -
Lal16g0209 900 Pfam Peroxidase 654 765 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal16g0209 900 PRINTS Plant peroxidase signature 646 665 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal16g0209 900 PRINTS Plant peroxidase signature 670 690 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal16g0209 900 PRINTS Plant peroxidase signature 710 723 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal16g0209 900 PRINTS Plant peroxidase signature 729 739 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal16g0209 900 PRINTS Plant peroxidase signature 748 763 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lal16g0209 900 PRINTS Haem peroxidase superfamily signature 668 682 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal16g0209 900 PRINTS Haem peroxidase superfamily signature 730 747 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal16g0209 900 PRINTS Haem peroxidase superfamily signature 748 760 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal16g0209 900 PRINTS Haem peroxidase superfamily signature 820 835 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal16g0209 900 ProSitePatterns Protein kinases ATP-binding region signature. 362 385 IPR017441 GO:0005524
Lal16g0209 900 MobiDBLite consensus disorder prediction 6 27 - -
Lal16g0209 900 SMART serkin_6 356 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g0209 900 ProSitePatterns Peroxidases active site signature. 668 679 IPR019794 GO:0004601
Lal16g0209 900 ProSiteProfiles Plant heme peroxidase family profile. 636 900 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lal16g0209 900 Pfam Protein kinase domain 357 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g0209 900 Gene3D Transferase(Phosphotransferase) domain 1 353 638 - -
Lal16g0209 900 ProSiteProfiles Protein kinase domain profile. 356 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g0209 900 SUPERFAMILY Heme-dependent peroxidases 636 900 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lal16g0209 900 SUPERFAMILY Protein kinase-like (PK-like) 348 659 IPR011009 -
Lal16g0209 900 MobiDBLite consensus disorder prediction 272 346 - -
Lal16g0209 900 Gene3D Peroxidase, domain 2 768 879 - -
Lal16g0209 900 MobiDBLite consensus disorder prediction 332 346 - -
Lal16g0209 900 MobiDBLite consensus disorder prediction 272 308 - -
Lal16g0209 900 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0209 Lal-Chr16 1268936 1277661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0209 31 651 MAP Kinase Kinase Kinase AT5G66850 52.623 0.0 586
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lal16g0209 Pkinase 3.3e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0209 - - cam:101502514 731.095