Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0205 ATGGCAGATCTGTTAAGTGGAGGTGCTGTTGGAGCAGTGTTAGGAGAAGTGTTGAAAGCTGCTATTGAAACCATCCAAAAGGGTCGAGAATTCAAGCCAACTCTTGAAACCAACATAGATACTTTGAACTCTTTGGCTCCATTAGTGCAAGAGATGAAACGTTACAATCAGGAGTTGGATCGCCCTATAGAAGAGATAGAGAGGCTTGAACATGAAATACAAGCTGGTGAAGAGCTTGCAAGAAAGTGCTCCAAAATTGGTCTCTGGAAATTATTTTCTTTCCCTTATTACCAGGGAAAGCTCAAGTCCAAAGATGAGTCTCTCAAGAGGCACTTATCTGTTAACGTGCAGGCTCAGATTGCAAGGAACTTGATGGAGGTTATGGCCAATGTGAGAAATATTCTTGAGATTCTTAATAAGAATATTGGGCAGTGTCATGGATACCAGATAAGTGGTATAAGTGGGGCTCCAGTGGAACCACAGTGTATGGGAATGGATGAACCTTTGAACAAGTTGAAGGGTGAGCTTCTTAAGGATGGTGTATCTGTTAATGTGTTGACTGGTTTGGCAGGATCTGGGAAAAGCACACTTGCTAAGAAGCTTTGTTGGGATCCACAAATCAAAGGTAAGTTTGGGGGGAATATCTTCTTTGTCACCGTCTCAAAAACGCCCAACTTGAAGACCATTGTGCAGACACTATTCGAATACTGTGGATGCCGGGTGCCTGAGTTTCAAAGTGATGAAGATGCAACTAACCAACTGGGAATGTTGTTGAGGCATATTGGGAAAAATCCAATATTGTTGGTCCTGGATGATGTTTGGCCCAAGTCAGAGGCACTTATTGAGAAGTTTAAATTCCAATTGTCAGACTACAAAATTTTGGTGACTTCAAGGGTTGCATTCAGAAGATTTGGCACACCATGCCAATTGGAACCAGTTGGTCATGATGATGCAGTATCCCTTTTCCATCACTTTGCTCAACTGAAAGGCTGCAGCAGCTCATACATTCCAGACAATAAACTTGTCCATGAGATAGTGAAAGGTTGTAAGGGTTCACCACTGGCGCTTGAAGTCATTGGTGGATCACTTTGTAAGCAGCCATTTGAAGTATGGCAAAATATGAAAGAAAGGTTGCAAAGTCAGTCCATTTTGGACTCGAGTGATACCGACTTGCTTTATCAACTCCAACAAAGTTTAGACATACTGGAGGATAGGTTCTCTATCAATGAGAAGGAGTGCTTCATGGATCTAGGGCTATTTCCTGAAGACCAAAGGATCCCTGTTGCTGCCCTCATTGATATGTGGGCAGAACTGTATAACCTGGATGAGGATGGTATGAATGCAATGACCGTTGTCCTTGATTTAGCCACCAAGAATTTGATTAATCTCATAGTTACAAGGAAAGTTGGAAAGGACGCAGACATGTACTACAATAACCACTTTGTGGTGTTGCATGATCTCCTAAGAGAGCTAGCCATCCATCAAAGTAACCAAGAACAATTTGAAGAGAGAAAAAGACTGATTGTTGACTTAAATGGAGATAATCGTCCTGCATGGTGGGTAGGTCAGAATCAGCAAGGGATCTTTCGCCGCGTTTTGTCATACTTACCAAGAACCTTGACACAACAGAAACAACCAAGTGTAGCTGCTCGCATATTGTCTATATCAACTGATGAAAATTTCACTTCAGATTGGTGTGACATGCAACCTGATGAAGCTGAGGCTCTGGTTTTAAATCTTAGCTCTAGCCAGTACACCTTACCTGAGTTTACACAGAAAATGAGTAAACTCAAAACTCTGATACTCACAAATTACGGTTTCCATCGTTCTGAAATAAAAAAGTTTGAGCTGCTTGCTGCTTTATCAAACTTAAAAAGAATCAGATTGGAAAAGGTTTCAGTTCCTTCCCTGTGTATATTGAACAACCTGAGAAAATTATCCCTTCACATGTGTAATACAAGGCAAGCTTTTGAAAGTTGTTCTATCCAAAATATTATGCCAAAACTGGTAGAGTTGAGCATTGACTATTGCAATGATCTTGTAAAACTGCCTGATTGGATCTGTATTACCTCCTTGAAGAAGCTCAGCATCACTAACTGTCATAAACTTTGTGCACTGCCAGAAACACAAGAATTTGCAAAGCTGGAGAATTTGGAAGTGTTAAGGCTTAGTTCATGTTCTGATTTAAAAGAGATGCCAGAATATGTAGGAGATCTTCATTCGCTACGTTGTCTTGACATATCAGACTGCATAAGCCTTGACAAATTACCAAAAGACATTGGTGATTTGCATAACCTTGAGAAGCTTTACTTGAAAGGTTGCTCAGGACTGAGTGAATTACCATACTCGGTCATGAAGTTTAAGCATTTAAAGCATGAATTATATGTGATATGTGATGAAGAAAGAGCTTCCTTATGGGAACATTTTCCTACCATTCCTAATTTGAAGATAGAAATGCCTAAAGTGGATATTACCTTAAGTTGGCTTCATGGAGTTCATTCCTGA 2505 0.404 MADLLSGGAVGAVLGEVLKAAIETIQKGREFKPTLETNIDTLNSLAPLVQEMKRYNQELDRPIEEIERLEHEIQAGEELARKCSKIGLWKLFSFPYYQGKLKSKDESLKRHLSVNVQAQIARNLMEVMANVRNILEILNKNIGQCHGYQISGISGAPVEPQCMGMDEPLNKLKGELLKDGVSVNVLTGLAGSGKSTLAKKLCWDPQIKGKFGGNIFFVTVSKTPNLKTIVQTLFEYCGCRVPEFQSDEDATNQLGMLLRHIGKNPILLVLDDVWPKSEALIEKFKFQLSDYKILVTSRVAFRRFGTPCQLEPVGHDDAVSLFHHFAQLKGCSSSYIPDNKLVHEIVKGCKGSPLALEVIGGSLCKQPFEVWQNMKERLQSQSILDSSDTDLLYQLQQSLDILEDRFSINEKECFMDLGLFPEDQRIPVAALIDMWAELYNLDEDGMNAMTVVLDLATKNLINLIVTRKVGKDADMYYNNHFVVLHDLLRELAIHQSNQEQFEERKRLIVDLNGDNRPAWWVGQNQQGIFRRVLSYLPRTLTQQKQPSVAARILSISTDENFTSDWCDMQPDEAEALVLNLSSSQYTLPEFTQKMSKLKTLILTNYGFHRSEIKKFELLAALSNLKRIRLEKVSVPSLCILNNLRKLSLHMCNTRQAFESCSIQNIMPKLVELSIDYCNDLVKLPDWICITSLKKLSITNCHKLCALPETQEFAKLENLEVLRLSSCSDLKEMPEYVGDLHSLRCLDISDCISLDKLPKDIGDLHNLEKLYLKGCSGLSELPYSVMKFKHLKHELYVICDEERASLWEHFPTIPNLKIEMPKVDITLSWLHGVHS 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0205 834 Gene3D Ribonuclease Inhibitor 539 802 IPR032675 -
Lal16g0205 834 PRINTS Disease resistance protein signature 183 198 - -
Lal16g0205 834 PRINTS Disease resistance protein signature 260 274 - -
Lal16g0205 834 PRINTS Disease resistance protein signature 349 363 - -
Lal16g0205 834 PRINTS Disease resistance protein signature 713 729 - -
Lal16g0205 834 SUPERFAMILY L domain-like 559 815 - -
Lal16g0205 834 Coils Coil 484 504 - -
Lal16g0205 834 Coils Coil 52 72 - -
Lal16g0205 834 Pfam NB-ARC domain 167 391 IPR002182 GO:0043531
Lal16g0205 834 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 417 IPR027417 -
Lal16g0205 834 Gene3D - 396 496 IPR036388 -
Lal16g0205 834 Gene3D - 313 395 IPR042197 -
Lal16g0205 834 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 1 820 IPR039203 GO:0050832
Lal16g0205 834 ProSiteProfiles RPW8 domain profile. 1 150 IPR008808 -
Lal16g0205 834 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 2 133 IPR008808 -
Lal16g0205 834 Coils Coil 121 141 - -
Lal16g0205 834 Gene3D - 152 303 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0205 Lal-Chr16 1237031 1244865 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0205 619 791 WRKY Transcription Factor Family AT4G12020 28.814 3.38e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0205 - - gmx:100792590 1239.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0205 16 1237031 1244865 Lal16g1413 16 10905604 10911760 PCT
Lal16g1413 16 10905604 10911760 Lal16g0205 16 1237031 1244865 PCT