Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0204 ATGTCGTTTTTCTCGAAACCGCAGCAACAACAACAGCAAAATCAAATGTTCCTATTCACTAACGATAAAACTTCCGCCAGTTATAGTACTAATTGGGCGGATCTACATCCTTCAAATCGATGTTGTCTCTTACTTAGGGAGCGTATGTTGGAGTATCGGGATGAAAGCCAGAGATTAGATCAGTCTACTCGTCTTTATGATTCTTTTGTTTCTATTGATGGATTTGAGGTTGATGCTACCCATATTGTCCAGGAACTTGGTGGAATTGGCACTGCTATGGATCGGCAGAAAACTTTGTTGCACGAACTGATGTCTGTTGGAAAGGATATGTTGTGTAACACAGAGGTTGCTGTTCGTTCCTTTATGATGTTACGTCCAAGGTTCCTTCATCACAGTGGGGGTGCATCAGGTGCCACTGCTCCATCACAGACTCCCGGAGCGACACAAGGTTCAAGTAACCAACCGACAGCTACATCTATAGTGCCTGTTTTTGATTTCTACAGTGGTCTTCCAAGGAAACCATCACCCTTTTTACAGCAAACACTTTTAAGATTTGAGAAGTATATCGGTGAATGCCATCAGTGGATTGAAGAGTTGGAGCAGCTGCTTCTCTTAGACTCTGAGAGAAACGCTTCCAGTAATGGATCCTCATTATTGCAATCTCTTCCCAAAGTCATGAAGAATGTGCATGACTTTTTTGTTAATGTGGCTGCAAAGAATACCGAGCTGATCAGCGCCGCCAGGGTTGCTGGGTTGTTTTCCAGTTCAGGAACTCAAGGAGCATTGCCTGCCCCACATACCTCTGCACCACCTTCATCTTCATCATCAGGGAGTGGATTCTCTCTTTTTATCACACCTTCTGCTCCATCTTCCTCTATGTCGTTGTTTGCAACACCATCAACTACTTCTGCTCCAGCATCCTCTTGGTTTGCATCATCTAGTGCTGCCGCTCCATCCTCACTTTTTGGTTCTGCATCATCCGTACCTGGTCCTGCTTCAACTCCTTCGCTGTTTAGTAATACTGCTTCGTTGTTTGGTTCAACTCCAGCTTCAGGTTCACTCTTTTCAGGTGCTGTGACAGGATCAGGGGCAAGCTTTGGACCTGGATCAAAAAATCCACGGCCGAAATCAAGAACTGCTAGACGCTAA 1149 0.4491 MSFFSKPQQQQQQNQMFLFTNDKTSASYSTNWADLHPSNRCCLLLRERMLEYRDESQRLDQSTRLYDSFVSIDGFEVDATHIVQELGGIGTAMDRQKTLLHELMSVGKDMLCNTEVAVRSFMMLRPRFLHHSGGASGATAPSQTPGATQGSSNQPTATSIVPVFDFYSGLPRKPSPFLQQTLLRFEKYIGECHQWIEELEQLLLLDSERNASSNGSSLLQSLPKVMKNVHDFFVNVAAKNTELISAARVAGLFSSSGTQGALPAPHTSAPPSSSSSGSGFSLFITPSAPSSSMSLFATPSTTSAPASSWFASSSAAAPSSLFGSASSVPGPASTPSLFSNTASLFGSTPASGSLFSGAVTGSGASFGPGSKNPRPKSRTARR 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0204 382 MobiDBLite consensus disorder prediction 136 156 - -
Lal16g0204 382 PANTHER NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1 7 243 IPR024882 GO:0005643|GO:0006913|GO:0008139|GO:0017056
Lal16g0204 382 MobiDBLite consensus disorder prediction 358 382 - -
Lal16g0204 382 MobiDBLite consensus disorder prediction 133 156 - -
Lal16g0204 382 Gene3D - 173 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0204 Lal-Chr16 1235301 1243343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0204 16 382 NAC Transcription Factor Family AT4G37130 49.770 1.86e-112 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0204 K14307 - gmx:100805204 460.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0204 16 1235301 1243343 Lal23g1355 23 14320094 14324326 LSH