Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0191 ATGTCCCAAGATTACCAACAAGGAATCTTTACCTTCTTGAACGGGTTCGAAAGAACCACAGTAACTCATCAAGATCAGCAGCAGCAGGAGCAACAGATCCGGAGGGACAAGGTGAGGTTGCAAGAAGGCTTCGAGCCTGCACCACCACCGCAACAATTAGTTGGGATAGAAGAAGAACAACCGGGAGGGCTCCCGGTTTATGAAACGGCGGGGATGCTATCAGAGATGTTTAATTTCCCTCATGACGGCGCCACCGCGGCTGAATTGTTGGAACAACAGCAGCAGCAGATGACGGCGACCTTTCGGTCCTCGAGGCCTGAACCAGTAGCCAGTGGAAGCGAGTGGTACGGAAGCAACAGACAAGGGATAATAACTGGGTTGGGACCTTTGGGAGATTCAACAAAGAATCATCATCATTCTCAGATTTCAAGCATTAATGCAGCAGACTCAGCTGCTCATCAAGCCATGCAACTTTTTCTTATGAACCCTCAAACAAGATCTCCTTCTCCTCCTCCTCCTCCTCCTCTTCCTCCTACAAATCCATCATCTTCCACTCTCCACATGTTACTTCCCAACCCTTCTTCAAACCCCCTACAAGGTTTCGCTGCCGGTTCAACAGGTGGAGGGTCTTTTGGCCAATTCACATGGGTTCCTAATCACAACACTGAAGATGGAGGCAACACCGGTGGGGTTGTGGAAGGTCAGGGTCTTTCGTTATCATTATCCTCTTCATTGCATTTACAAGGTTCTATGGATGCTGCAAAAGCTGAAGAGTTGAGGATGGGGGAAAGTGGTTTTCTATATTACAATCAAGGACCTGGTGCTGTTTCTTCTTCATCTCAGTATCCGTACAAGAACCTTGTTAGTAGTCATCCTCATCATCTGCAAGCATTGCATTTACAAGGTTCTATGGTACACCAAGGACATCATGTTGGTTTTGGAACATCATCATCATCCTTAAGTGCAGTAAATGTTCTTAGAAACTCAAAGTATGTTAAAGCTGCACAAGAATTGCTTGAGGAGTTTTGCAGTGTAGGGAGGGGTCAATTCAAGAAAAGCAAGATCAGTAGACAGAACTCAAACCCTAATAATTCAGACACCGTTGGTGGCGGTGGAGGTTCATCAAAGGATCCTCCTCCTCCTCCTCCTCCTATTACTAGTTTGTCAGCGGCAGATAGGATTGAGCATCAAAGAAGGAAGGTGGACCGGAGATACAACCACTACTGTGAACAAATGCAAATAGTAGTAAACTCATTTGATGTAGTGATGGGTTTTGGGTCAGCAGTTCCGTACACTGCATTGGCACAGAAAGCAATGTCAAGGCATTTCCGGTGTCTGAAGGATGCAATAACAGCAGAGTTGAAGAACAGTTGTGAGGTGCTTGGAGAGAAAGATGGAGGTGGTTGTTCAGGTTTGACAAAAGGAGAGACACCAAGGCTTAAGATGCTTGAGCAAAGTCTAAGACAACAGAGAGCATTCCATCAAATGGGGATGATGGAACAAGAAGCTTGGAGACCACAGAGAGGGTTGCCTGAAAGATCTGTTAACATTTTGAGAGCTTGGCTTTTCGAGCATTTTCTCCACCCGTATCCAAGCGATGCAGATAAGCAACTGTTGGCACGACAAACTGGGCTATCGAGAAATCAGGTATCAAATTGGTTCATTAATGCCAGGGTTCGGTTGTGGAAACCTATGGTTGAAGACATGTACCAACAAGAACTTAAAGAAACAGAGGGTGATTCAGAAGAGAGAGAAGATATGAACCAAAGCAACAACAACAGCAATGGTGGCCAACTAGCACAAACTCCAAATGCAGCAGCTACAACATCAACAGCAACAACAGCGCCACCACCACAACCAATAACTGGCAAAAGATCCGATATCAATGCTCATGATAGCGACCCTTCACTTGTTGCAATCAATAGAGAAGCCTTTTCGGAAAACCAAGCCTCCACCACCATTATCAACGCCACAACCTCTGAGGTGGCGCCACCAGTGTCTCAGTGCTTCGATTCAGACCTGACCCACCATAGATCAATGGCAACTGAAGACACGTGTCGCCATGGCAGCACCGTGACAGGAGCTGATTATGGGACCTCGTTCTCTGCAGGCGGTGCTGACATTGGATCCACACTTATTAGATTTGGGACCACCGCCGGTGACGTGTCACTAACCTTAGGGCTACGCCACGCCGGGAACATGCCAGAGAATACACCTCCTTTCTCTGTTAGAGACTATGGAGCCATTTAA 2250 0.4676 MSQDYQQGIFTFLNGFERTTVTHQDQQQQEQQIRRDKVRLQEGFEPAPPPQQLVGIEEEQPGGLPVYETAGMLSEMFNFPHDGATAAELLEQQQQQMTATFRSSRPEPVASGSEWYGSNRQGIITGLGPLGDSTKNHHHSQISSINAADSAAHQAMQLFLMNPQTRSPSPPPPPPLPPTNPSSSTLHMLLPNPSSNPLQGFAAGSTGGGSFGQFTWVPNHNTEDGGNTGGVVEGQGLSLSLSSSLHLQGSMDAAKAEELRMGESGFLYYNQGPGAVSSSSQYPYKNLVSSHPHHLQALHLQGSMVHQGHHVGFGTSSSSLSAVNVLRNSKYVKAAQELLEEFCSVGRGQFKKSKISRQNSNPNNSDTVGGGGGSSKDPPPPPPPITSLSAADRIEHQRRKVDRRYNHYCEQMQIVVNSFDVVMGFGSAVPYTALAQKAMSRHFRCLKDAITAELKNSCEVLGEKDGGGCSGLTKGETPRLKMLEQSLRQQRAFHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKQLLARQTGLSRNQVSNWFINARVRLWKPMVEDMYQQELKETEGDSEEREDMNQSNNNSNGGQLAQTPNAAATTSTATTAPPPQPITGKRSDINAHDSDPSLVAINREAFSENQASTTIINATTSEVAPPVSQCFDSDLTHHRSMATEDTCRHGSTVTGADYGTSFSAGGADIGSTLIRFGTTAGDVSLTLGLRHAGNMPENTPPFSVRDYGAI 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0191 749 Pfam Associated with HOX 325 451 IPR006563 -
Lal16g0191 749 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 2 51 737 - -
Lal16g0191 749 MobiDBLite consensus disorder prediction 573 632 - -
Lal16g0191 749 MobiDBLite consensus disorder prediction 351 393 - -
Lal16g0191 749 ProSiteProfiles 'Homeobox' domain profile. 501 564 IPR001356 GO:0003677
Lal16g0191 749 MobiDBLite consensus disorder prediction 182 198 - -
Lal16g0191 749 MobiDBLite consensus disorder prediction 573 587 - -
Lal16g0191 749 CDD homeodomain 504 565 IPR001356 GO:0003677
Lal16g0191 749 SUPERFAMILY Homeodomain-like 506 571 IPR009057 -
Lal16g0191 749 SMART HOX_1 504 568 IPR001356 GO:0003677
Lal16g0191 749 Gene3D - 507 569 - -
Lal16g0191 749 SMART prehox3 320 452 IPR006563 -
Lal16g0191 749 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 51 737 - -
Lal16g0191 749 MobiDBLite consensus disorder prediction 351 371 - -
Lal16g0191 749 MobiDBLite consensus disorder prediction 162 198 - -
Lal16g0191 749 Pfam Homeobox KN domain 521 560 IPR008422 GO:0003677|GO:0006355
Lal16g0191 749 MobiDBLite consensus disorder prediction 588 620 - -
Lal16g0191 749 MobiDBLite consensus disorder prediction 165 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0191 Lal-Chr16 1155619 1163024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0191 1 97 Homeobox Transcription Factor Family AT2G23760 35.294 8.63e-07 50.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Lal16g0191 POX 1.9e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0191 - - lang:109332370 916.761
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0191 16 1155619 1163024 Lal23g1376 23 14437334 14445938 LSH
Lal16g0191 16 1155619 1163024 Lal15g1093 15 9467215 9477223 PCT
Lal15g1093 15 9467215 9477223 Lal16g0191 16 1155619 1163024 PCT