Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0168 ATGAGAAAGGAAATAGAGATGCCAAACACTTTAGGTTACAAAAGAGGTTCTTCTTCCAAGTTGTCTTCTCCAACTTCAGATGAAAGAAGTGATCATCAACCTTCTCCTGCTCCTCAAATTTTACACTGCTACCGTCATCATCATCTTTATGCTCGTCTTGCACCTACCCAACTTCATCAATCTCAGAAGCCAAGTGTAGACCCAGTTCTAAGTTCATCTCCTATTGTCACAACGAGCATAACGATCACCCCAATTACCCCACCACAAATAACTATTAACACGACAGCGTCGATCAGATACCGAGAATGTCTAAGGAACCACGCAGCCAGCATGGGGAACCATGTTGTAGATGGATGTGGAGAATTCATGCCAAGTGGGGAATGCACCCCAGAATCTCTTAAATGTGCTGTTCGTGATTGCCATCGCAATTTCCACAGAAAAGAAGCTGAAGGGGAACCTGTACAACATGCTTCTAACTATTACGCCTATCACTTCAATAAGCACAACAACACTCACAATATAATATATTCTCCTCCTCCTTATCATAATAATCTTCCTATTCAGTTCCACGCCCCATCCCTTTCTATGCATCAACATCATAGATTTTCTCACGGGGTTGCCACACCTACAAGCCTGATTCCGCCAACGATGATAGCCTTTGGAAGTGGTGGAGGCCTCGCAGATTCATCCAGTGAAGATATCAACATGTTTCAGTGTAATAGAACAGGACAGATACTAGTGCAGCCACCATTCGAGTCCTAG 762 0.4357 MRKEIEMPNTLGYKRGSSSKLSSPTSDERSDHQPSPAPQILHCYRHHHLYARLAPTQLHQSQKPSVDPVLSSSPIVTTSITITPITPPQITINTTASIRYRECLRNHAASMGNHVVDGCGEFMPSGECTPESLKCAVRDCHRNFHRKEAEGEPVQHASNYYAYHFNKHNNTHNIIYSPPPYHNNLPIQFHAPSLSMHQHHRFSHGVATPTSLIPPTMIAFGSGGGLADSSSEDINMFQCNRTGQILVQPPFES 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0168 253 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 99 148 IPR006456 -
Lal16g0168 253 MobiDBLite consensus disorder prediction 12 33 - -
Lal16g0168 253 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 100 148 IPR006456 -
Lal16g0168 253 MobiDBLite consensus disorder prediction 1 38 - -
Lal16g0168 253 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 7 29 240 - -
Lal16g0168 253 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 29 240 - -
Lal16g0168 253 Pfam ZF-HD protein dimerisation region 98 149 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0168 Lal-Chr16 1020704 1021465 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0168 79 237 ZF-HD Transcription Factor Family AT2G18350 39.130 5.25e-24 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Lal16g0168 ZF-HD_dimer 1.6e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0168 - - lang:109332583 219.55