Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0167 ATGGGATCATCATGGACACCAAGGCAAAACAAAGTATTTGAAGAGGCCCTTGCTATATATGATAGGGAAACACCTGATAGGTGGCAGAATGTTGCAAAAGTGGTTGGAAAACCCGTCGAAGAGGTTAAAAGGCACTATGAGTTACTCAAAGAAGATATCAACCGCATTGAGCGTGGGTCTTCATGA 186 0.4301 MGSSWTPRQNKVFEEALAIYDRETPDRWQNVAKVVGKPVEEVKRHYELLKEDINRIERGSS 61
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0167 61 Coils Coil 39 59 - -
Lal16g0167 61 SMART sant 1 52 IPR001005 -
Lal16g0167 61 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 60 - -
Lal16g0167 61 SUPERFAMILY Homeodomain-like 3 57 IPR009057 -
Lal16g0167 61 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 60 IPR044636 GO:0003700
Lal16g0167 61 Gene3D - 2 52 - -
Lal16g0167 61 ProSiteProfiles SANT domain profile. 1 54 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0167 Lal-Chr16 1017695 1019835 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0167 - - lja:Lj4g3v0973380.1 110.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0167 16 1017695 1019835 Lal23g1420 23 14712257 14713949 LSH