Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0138 ATGCCGCTGATGAAGCCACTTACTGATAAACTTGCATCCCAACTCCACCAGGCGGCGCGTGCAACTTCCGACCTTTACGACAGTCCCGCGCGTCGCATCATCATAGACACTCACCAAGTCCTCAATAAAGCCCTCTCACTAGTCCTCAAGTGTCACGCCAAATGCCTCTTCAAGCGCGTCTTCACCATTATCCCCACCAACGCGTTTAGAAAAACCTCCTCCTTGTTGGAAAACTCCACCGGCGATGTCTCCTGGCTCCTCCGTGTTTCCACTCCCGCTGACGATCGCGCCGACGCGGATATTCACCTTGGTCTCCCTCCCATCGCAGCCAATGTACCCATCCTGGGTTTAATTTGGGAGCAGATTGCTATACTCTGTACTGGCTCGCCGGAGGACAGGTCCGACGCGGCGGCCTCACTGGTGTCCATTATCCGCGGCAATGATCGATGCGGAAAGCTGATAATGAAAGAAGGAGGTGTGGGGCCCTTATTGAAATTGATAGAGGAAGGAACAGTAGAAGGACAGGAAAATGGTGCAAGGGCTATTGGTCTATTGGGTTGTGAACATGAGAGTGTGGAATATATGGTTAACATTGGATTTAACATGAAAGGAAGGGAGCTTGAAGACCCTGAGACTAAGGCCAGCATGAAGGAAATGGCAGCAAGGGCGCTGTGGAAACTAGCTAAGGGTAATTCGCAGATTTGTCGCAGCATCACAGAATCAAAGGCTCTTAACCATTTGATCCCATAA 750 0.5093 MPLMKPLTDKLASQLHQAARATSDLYDSPARRIIIDTHQVLNKALSLVLKCHAKCLFKRVFTIIPTNAFRKTSSLLENSTGDVSWLLRVSTPADDRADADIHLGLPPIAANVPILGLIWEQIAILCTGSPEDRSDAAASLVSIIRGNDRCGKLIMKEGGVGPLLKLIEEGTVEGQENGARAIGLLGCEHESVEYMVNIGFNMKGRELEDPETKASMKEMAARALWKLAKGNSQICRSITESKALNHLIP 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0138 249 SUPERFAMILY ARM repeat 123 248 IPR016024 -
Lal16g0138 249 Gene3D - 111 249 IPR011989 -
Lal16g0138 249 PANTHER ARMADILLO REPEAT ONLY 1 5 199 - -
Lal16g0138 249 PANTHER ARMADILLO REPEAT ONLY 1 199 244 - -
Lal16g0138 249 PANTHER ARMADILLO REPEAT ONLY 4 199 244 - -
Lal16g0138 249 PANTHER ARMADILLO REPEAT ONLY 4 5 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0138 Lal-Chr16 820357 821611 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0138 - - gmx:100794693 265.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0138 16 820357 821611 Lal23g0816 23 10641260 10643325 LSH
Lal16g0138 16 820357 821611 Lal15g1516 15 17296118 17299483 LSH
Lal16g0138 16 820357 821611 Lal23g1471 23 15061708 15063711 LSH
Lal16g0138 16 820357 821611 Lal15g0465 15 3164268 3166142 LSH
Lal16g0138 16 820357 821611 Lal15g1516 15 17296118 17299483 PCT