Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0136 ATGGGTGTTTATGGGGCCGTCTTAGGAGATGATGTTGTTACTATTGATGTACATGCAGCAAAAGGTCTAGTTCGCTCTGGCTACGTTTATCTTGATGTTAGGACGGTGGAAGAGTTCCAGAAAGGGCACGTAGATGCAACTAAAATCATTAATATTCCGTACATGTTGAGTACACCTAAGGGTATGGTGAAGAACCCAAACTTTCTGAAGGAGGTTTCATCTGCTTGCAACAAAGAAGATCATTTCATCGTGGGTTGCAAAAGTGGAGTGAGATCTCTGTATGCAACTACTGATCTTCTAGCTGATGGTTTTAAGAATGTGAATAACATGGAAGGAGGTTATATGGAGTGGGTTAAAAACAAGTTTTCTGTGAAAGCATCATCAATCATAGAGGAGCTCTAA 402 0.4055 MGVYGAVLGDDVVTIDVHAAKGLVRSGYVYLDVRTVEEFQKGHVDATKIINIPYMLSTPKGMVKNPNFLKEVSSACNKEDHFIVGCKSGVRSLYATTDLLADGFKNVNNMEGGYMEWVKNKFSVKASSIIEEL 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0136 133 SMART rhod_4 15 123 IPR001763 -
Lal16g0136 133 Pfam Rhodanese-like domain 28 119 IPR001763 -
Lal16g0136 133 PANTHER THIOSULFATE SULFURTRANSFERASE 18 10 128 - -
Lal16g0136 133 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 11 122 IPR036873 -
Lal16g0136 133 CDD RHOD 19 118 - -
Lal16g0136 133 Gene3D - 8 126 IPR036873 -
Lal16g0136 133 PANTHER THIOSULFATE SULFURTRANSFERASE 18 10 128 IPR044684 GO:0003824
Lal16g0136 133 ProSiteProfiles Rhodanese domain profile. 24 126 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0136 Lal-Chr16 814227 815202 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0136 1 124 Sulfurtransferasese or Rhodanese AT5G66170 51.613 1.35e-46 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0136 - K15692 aip:107642568 200.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0136 16 814227 815202 Lal16g1828 16 17409670 17412720 PCT
Lal16g1828 16 17409670 17412720 Lal16g0136 16 814227 815202 PCT