Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0135 ATGGAAGAAAATGGAAAAACAAGATCCTTGGAGGATACCCCCACTTGGGCTGTAGCAACGGTCATCACTCTAATGGTTTCTCTTAGTTTCATGTTTCAAATCACATTAGAAAAATTTGGAAAGTGGTTGGACAGAACTAAGAGAAAATCTATGCTTTCTGCTCTTGAAAAGGTCAAAGAAGAACTAATGCTTTTTGGGCTGCTTTCACTATTGATGGGACATTGGACTATTTTTGTGGCAAAGATTTGTGTCAAGGCATCAGTATTAAAAAGCAGATTTGTTCCATGTGCAATAGAAAAGAATTCTGGAACAGTGGAACACATTTTCTGGCGGAGTTCAGAACATTCAAATAGAACAGTTCTAGAAGAAAATGTGAACAACGGTCTGCATAATTATTGTCCTAAGGGTAAGGAATCATTCGCTTCATATGAAAGCCTTGAGCAGCTTCATTCCTTACTGTTTGTCCTCGCAGTCACTCATGTTTTCTATAGCTTTATTGCTGTTGCCTTGGCCATGATCAAGATATATAGCTGGAGAATATGGGAAAATGAAGCTAAGACTATTGCTAGACAAAGCTTCCAAGATACTCCACAAAATACCTTAAACATAAGGTTGAGTCGGCTTCGTACATTCATCTTTCACCAAACATCCCATCCCTGGAGTAATCACAAATTTCTTGTTTGGCTGCTATGTTTCAGCCGTCAATTTTGGAGTTCTATCAACCGAGCTGATTATATGGCATTGCGCTTTGGCTTCATTACTAATCATGAGCTTCCTCTAACATACGATTTCCACAACTATATGCTTCGTAGCATGGATGAGGAGTTCCGTGACATTGTTGGTATTAGTGTGCCACTCTGGATATATGCCATATGCTGCATTATTCTAAATTTTCACGGAAGCAATATTTACTTTTGGCTTTCCTTCCTTCCAGCAGTTCTGATCCTCATAATTGGTACTAAGTTGCACCGTGTGGTGGTAAAGTTGGCTGTTGAAATAATGGATAATTGCCAAGACACTAGACCTCTTAACTTAAGAGATAAGCTGTTTTGGTTTGGAAAGCCCAAGCTTCTGTTACAGTTAATACATTTGATATCATTCTTGAATGCTTTTGAAATGGCAACATTCTTATGGTCCCTGTGGGAAATTAAAGAGGCCTCTTGTTTTATGAAGAACCGAACGTTTATTGTGATTCGTTTGTCATTTGGGATCATCTCACAAATCTGGGGCAGCTTTATAACGTTTCCTCTCTATGTTATCATCACACAGATGGGGTCAAAGATAAAGAAGTCTGTAATATCTGAAAATGTAAGAAAATCACTCTCTAAATGGCAGAAAAGAGTGAAGAACAGGCAAGGTTCCTCTTGTGCACTCCAAAATGCAACCTCAGAAACAACATCGGATTCTTTGTTGCATGACTATGAATCATTTCCAAGTTGTGAAGATTATCATGATCATAATGCTACAATGATCTGTATTGACAATTCTGAATGGATGCGTAACGGAGATTACTCTCCTTCTCGGTTTCAAGCTCAAGCAGACGCTGTTAATCTTATTTGTGGTGCTAAAACCCAGTCTAATCCAGAGAATACAGTTGGGATTCTCACAATGGCAGGGAAAGGCGTCCGTGTTTTGGTCACCCCTACTAGTGATCTGGGCAAGATTCTAGCTTGCATGCATGGACTAGAAATAGGTGGTGAGATGAACGTAGCTGCCGGCATACAGGTGGCACAATTGGCTCTTAAGCATCGGCAAAATAAAAAGCAGCAGCAAAGGATTATTGTTTTTGCAGGAGGTCCTGTTAAGCATGAGAAGAAAATGTTGGAGATGATTGGGAGAAAGTTGAAAAAGAATAGTGTAGCTCTTGATATTATCAATTTTGGTGAAGAAGATGAAGGGAAAACAGAAAAGCTGGAGGGACTCCTTTCAGCCGTTAACAATAAAGATACTAGCCACATTGTTCATGTTCCAGCTGGGCCAGATGCTCTTTCTGATGTACTTATAAGTACACCTATTTTCACTGGTGATGGAGAAGGAGGAAGTGGGTTTGCTGCAGCTGCAGCAGCGGCTGCAGCTGGTGGTGCATCTGGATATGAATTTGGAGTGGATCCAAACTTGGACCCTGAACTGGCTCTTGCTCTAAGAGTTTCAATGGAAGAGGAGAGAGCCAGGCAGGAAGCAGCAGCCAAAACGGCTGCAGAGGATGCTGCCAAACAAGAGAAAGGAGGTGAACACCAAGTCAGCTCACAAGATGCAACAATGACAGAGCGTGCCAGTGCAGCAACTTCTGAAGCTGAGAATAAGACAAGTGATTTGATGGTTCGTGATGATGAGAATGCTTTGCTAGAGCAGGCACTTGCAATGTCAATGGATGATCCTGTCATTAGCCATGACGTGAAAGATACAGATATGTCAGAAGCTGCTTCAGATGATCCTGAGTTGGCTTTAGATAGTACAAAGGATGCAGCAAGCCAGTCGGACATGAGTAAATTGTTGGCTGATGAATCCTTTGTATCTTCTATCCTTGCATCGCTTCCCGGAGTTGACCCAAATGACCCTTCTGTCAAAGATTTGCTTGCCTCCATGCAAAGTCAGTCCGAGTCTCAGCAGAAGAACGAGGAGAAGCCATCATCAAAGGAAGAGGAGAAGAAATAA 2655 0.4139 MEENGKTRSLEDTPTWAVATVITLMVSLSFMFQITLEKFGKWLDRTKRKSMLSALEKVKEELMLFGLLSLLMGHWTIFVAKICVKASVLKSRFVPCAIEKNSGTVEHIFWRSSEHSNRTVLEENVNNGLHNYCPKGKESFASYESLEQLHSLLFVLAVTHVFYSFIAVALAMIKIYSWRIWENEAKTIARQSFQDTPQNTLNIRLSRLRTFIFHQTSHPWSNHKFLVWLLCFSRQFWSSINRADYMALRFGFITNHELPLTYDFHNYMLRSMDEEFRDIVGISVPLWIYAICCIILNFHGSNIYFWLSFLPAVLILIIGTKLHRVVVKLAVEIMDNCQDTRPLNLRDKLFWFGKPKLLLQLIHLISFLNAFEMATFLWSLWEIKEASCFMKNRTFIVIRLSFGIISQIWGSFITFPLYVIITQMGSKIKKSVISENVRKSLSKWQKRVKNRQGSSCALQNATSETTSDSLLHDYESFPSCEDYHDHNATMICIDNSEWMRNGDYSPSRFQAQADAVNLICGAKTQSNPENTVGILTMAGKGVRVLVTPTSDLGKILACMHGLEIGGEMNVAAGIQVAQLALKHRQNKKQQQRIIVFAGGPVKHEKKMLEMIGRKLKKNSVALDIINFGEEDEGKTEKLEGLLSAVNNKDTSHIVHVPAGPDALSDVLISTPIFTGDGEGGSGFAAAAAAAAAGGASGYEFGVDPNLDPELALALRVSMEEERARQEAAAKTAAEDAAKQEKGGEHQVSSQDATMTERASAATSEAENKTSDLMVRDDENALLEQALAMSMDDPVISHDVKDTDMSEAASDDPELALDSTKDAASQSDMSKLLADESFVSSILASLPGVDPNDPSVKDLLASMQSQSESQQKNEEKPSSKEEEKK 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0135 884 MobiDBLite consensus disorder prediction 857 871 - -
Lal16g0135 884 PANTHER MLO-LIKE PROTEIN 1 4 477 IPR004326 GO:0006952|GO:0016021
Lal16g0135 884 MobiDBLite consensus disorder prediction 746 768 - -
Lal16g0135 884 ProSiteProfiles VWFA domain profile. 488 672 IPR002035 -
Lal16g0135 884 Pfam von Willebrand factor type A domain 489 599 IPR002035 -
Lal16g0135 884 MobiDBLite consensus disorder prediction 801 828 - -
Lal16g0135 884 MobiDBLite consensus disorder prediction 843 884 - -
Lal16g0135 884 MobiDBLite consensus disorder prediction 723 745 - -
Lal16g0135 884 Gene3D - 703 791 - -
Lal16g0135 884 Gene3D von Willebrand factor, type A domain 487 669 IPR036465 -
Lal16g0135 884 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 705 724 IPR003903 -
Lal16g0135 884 Coils Coil 715 735 - -
Lal16g0135 884 SUPERFAMILY vWA-like 487 658 IPR036465 -
Lal16g0135 884 PANTHER MLO-LIKE PROTEIN 4 477 - -
Lal16g0135 884 MobiDBLite consensus disorder prediction 801 817 - -
Lal16g0135 884 SMART VWA_4 486 658 IPR002035 -
Lal16g0135 884 MobiDBLite consensus disorder prediction 723 774 - -
Lal16g0135 884 Pfam Mlo family 8 463 IPR004326 GO:0006952|GO:0016021
Lal16g0135 884 CDD VWA_26S_proteasome_subunit 488 671 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0135 Lal-Chr16 803690 812810 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0135 8 462 MLO family AT1G11000 50.107 4.93e-152 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0135 K08472 - gmx:100807014 712.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0135 16 803690 812810 Lal15g0094 15 645295 649366 LSH
Lal16g0135 16 803690 812810 Lal23g1474 23 15072836 15077472 LSH