Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0125 ATGGCGGAAACTAACGGTAACGGTTTCATCTACCTCCACGGTGACCTCCACCTTAAAATCATTGAAGCTCGCCGGTTACCTAACATGGACCTCATGTCGGAGCGTTTCCGCCGCTGCATCACCGCCTGTGACACTATTAACTTACCCTCCTCCAAAACCGTGGCTAAATCCGCCGACGGAGACCATCGTACCCACCAACACCGCCGGAAAATCATCACCAGTGACCCTTACGTTACTGTTACGGTCCCTCAGGCCACCGTGGCGCGCACGCGCGTGCTCAAGAACTCGCAAAACCCTTGCTGGGATGAGACTTTCAACATCCAGTTAGCGCATTCCGTCGAGTTTCTTGAATTCCGCGTCAAAGATGACGATATTTTCGGTGCACAGATAATGGGAGCGGTTAAGATCCCGGCGGTGGACATTGCCGCCGGTGAGTTGATTTCCGGCTGGTTCCCGATTCTCGGAGCTAACGAGAAGCCGCCGAAGCCTGACACTGCGCTTCGAATCGAAATGCAGTTCAAGGCAGTTTCTGAAAACCCGCTGTACAGAAATGGCATTGCGGCGGATCCGGAGCACGGGGGCGTGAGGCACACGTACTTTCCGGTGAGGAAGGGAAGCTCTGTGAGGCTTTACCAAGACGCGCAATGTCCCGATGGAATGTTACAAGAGATTCAGCTTGAGAATGGAAATGTTTATAGGCAAGGGAAGTGTTGGGAAGATATATGTTATGCAATAAGTGAGGCTCATCATATGGTGTATCTTGTGGGTTGGTCAATTTACCATAAGATAAAACTTGTTAGGGAACCAACTAGGCCTTTGCCAAGAGGTGGAGATTTGACACTTGGTGAATTGCTTAAGTATAAGTCTGAAGAAGGGGTTCGAGTTCTGTTGCTGATTTGGGATGATAAGACTTCACATGACAAGATCTTCTTCAAATCGATTACGGCTGGAGTAATGCAGACTCATGATGAGGAAACAAGGAAGTTTTTTAAACATTCTTCTGTCATGTGTGTTCTAGCACCCCGGTACGCTAGCAGCAAGATGAGCTTCTTGAAGCAACAGGCAAGTATTGGTATCAACATTTATGTTGTTGGAACTGTCTTCACACATCACCAAAAATGTGTTATTGTGGACACACAGGCTTCTGGCAATAACCGAAAGATAACTGCTTTTATGGGAGGTCTTGATATATGTGATGGTCGCTATGACACACCTGAGCACCGGCTTTTTCGTGATCTTGACACTGTATTTTCGGGTGATTTTCACAATCCTACGTTTCCTGCTGGAACGAGGGTTCCAAGGGAACCATGGCATGATTTGCACTGCAGAATAGATGGCCCTGCTGCATATGACGTTCTTATTAATTTTGAGCAGCGGTGGAGAAAATCAACTAAGTGGAAAGAGTTTGCAATAATTTTCAAAAAAACTTCTCATTGGCATGATGATGCTTTAATAAGAATTGAACGCATCTCGTGGATATTAAGTCCTTCCATTCCAACTCGTACTTCAAGGAATGCTTATACTACTGTTCCAGAGGATGACCCTTTAGTATGGGTTTCTAGTGAAGATGATCCTGAAAACTGGCATGTTCAGATCTTCCGCTCCATTGACTCAGGGTCCCTGAAAGGATTTCCCAAAGGTGTTGATGTTGCTCGGTCCCAGAATCTAATATGTGCTAAAGATTTGGTGATAGACAAGAGCATTCAAACGGCATACGTTCAAGCAATCAGATCTGCACATCATTTTATCTATATTGAAAACCAATATTTTATTGGATCATCATATGCATGGCCATCTTACAAAGATGCAGGGGCTGACAATCTCATCCCAATGGAATTGGCACTGAAAATTACTAGTAAAATCAAAGCTAAGGAGAGATTTGCTGTTTATATTGTTTTACCAATGTGGCCAGAAGGTGATCCAAAATCTGGGGCTATGCAAGAAATCCTCTTTTGGCAGAGCCAGACAATGCAAACAATGTATAATGTTATTGCCAAAGAATTAAAATCAATGCAACTTACTGATGTGCACCCACAAGATTACCTCAACTTCTATTGCCTTGGTAATCGGGAAGAATTTAATGGAGAAAGCTCGAGCACAAATGGTGCACAGGTCTCTGGAGCATATAAATGTCGTCGATTTATGATTTATGTGCATGCTAAGGGGATGATTGTCGATGATGAGTATGTTATATTGGGATCTGCTAATATAAACCAAAGATCTATGGCCGGTACTAAAGATACTGAGATAGCTATGGGTGCATATCAACCCCATTACACTTGGTCTGCGAAGAAAAGGCACCCATATGGTCAGATTTATGGTTACAGAATGTCACTGTGGAGAGAGCACCTTGGGACGTTAGAAGAAAATTTTGAGGAACCAGAGAAATTGGAGTGTGTACGGAAAGTAAATGAAATTGCAGAAGATAATTGGAGAAGATACACATCTGAAGAATTTTCACTATTGCAAGGACATATTCTTAAGTATCCCGTAAAGGTGGATTCTGATGGCCTGATTAGTTCCTTACCTGATTGTGAGAATTTCCCAGATGCTGGTGGTAAGATACTTGGGACTCACTCTCCAACAATTCCAGATATCCTAACAACTTAA 2610 0.4379 MAETNGNGFIYLHGDLHLKIIEARRLPNMDLMSERFRRCITACDTINLPSSKTVAKSADGDHRTHQHRRKIITSDPYVTVTVPQATVARTRVLKNSQNPCWDETFNIQLAHSVEFLEFRVKDDDIFGAQIMGAVKIPAVDIAAGELISGWFPILGANEKPPKPDTALRIEMQFKAVSENPLYRNGIAADPEHGGVRHTYFPVRKGSSVRLYQDAQCPDGMLQEIQLENGNVYRQGKCWEDICYAISEAHHMVYLVGWSIYHKIKLVREPTRPLPRGGDLTLGELLKYKSEEGVRVLLLIWDDKTSHDKIFFKSITAGVMQTHDEETRKFFKHSSVMCVLAPRYASSKMSFLKQQASIGINIYVVGTVFTHHQKCVIVDTQASGNNRKITAFMGGLDICDGRYDTPEHRLFRDLDTVFSGDFHNPTFPAGTRVPREPWHDLHCRIDGPAAYDVLINFEQRWRKSTKWKEFAIIFKKTSHWHDDALIRIERISWILSPSIPTRTSRNAYTTVPEDDPLVWVSSEDDPENWHVQIFRSIDSGSLKGFPKGVDVARSQNLICAKDLVIDKSIQTAYVQAIRSAHHFIYIENQYFIGSSYAWPSYKDAGADNLIPMELALKITSKIKAKERFAVYIVLPMWPEGDPKSGAMQEILFWQSQTMQTMYNVIAKELKSMQLTDVHPQDYLNFYCLGNREEFNGESSSTNGAQVSGAYKCRRFMIYVHAKGMIVDDEYVILGSANINQRSMAGTKDTEIAMGAYQPHYTWSAKKRHPYGQIYGYRMSLWREHLGTLEENFEEPEKLECVRKVNEIAEDNWRRYTSEEFSLLQGHILKYPVKVDSDGLISSLPDCENFPDAGGKILGTHSPTIPDILTT 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0125 869 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 12 173 IPR035892 -
Lal16g0125 869 Gene3D C2 domain 12 181 IPR035892 -
Lal16g0125 869 Pfam Phospholipase D C terminal 788 858 IPR024632 -
Lal16g0125 869 Pfam C2 domain 14 153 IPR000008 -
Lal16g0125 869 PANTHER PHOSPHOLIPASE D 8 869 IPR015679 -
Lal16g0125 869 SUPERFAMILY Phospholipase D/nuclease 198 472 - -
Lal16g0125 869 PIRSF PLD_plant 1 869 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Lal16g0125 869 ProSiteProfiles C2 domain profile. 1 151 IPR000008 -
Lal16g0125 869 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 714 741 IPR001736 GO:0003824
Lal16g0125 869 SMART C2_3c 15 150 IPR000008 -
Lal16g0125 869 Pfam Phospholipase D Active site motif 366 401 IPR001736 GO:0003824
Lal16g0125 869 SUPERFAMILY Phospholipase D/nuclease 565 799 - -
Lal16g0125 869 Pfam PLD-like domain 573 751 IPR025202 -
Lal16g0125 869 SMART pld_4 366 401 IPR001736 GO:0003824
Lal16g0125 869 SMART pld_4 714 741 IPR001736 GO:0003824
Lal16g0125 869 PANTHER PHOSPHOLIPASE D DELTA 8 869 - -
Lal16g0125 869 CDD C2_plant_PLD 10 173 - -
Lal16g0125 869 Gene3D Endonuclease Chain A 545 766 - -
Lal16g0125 869 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 366 401 IPR001736 GO:0003824
Lal16g0125 869 Gene3D Endonuclease Chain A 221 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0125 Lal-Chr16 721005 728046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0125 1 705 Phospholipase D Gene Family (Wang group) AT4G35790 69.958 0.0 1031
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0125 K01115 - gmx:100814486 1477.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0125 16 721005 728046 Lal23g1197 23 13301703 13307196 LSH