Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0095 ATTAGTGCAACATCAAAACTAGGAAGTACTAGTGGCTCTAAACTTCGTCATCATGTTTCAAAAAGGAAAGAACCTATAGCACCACTTTCTTGCAATGACAACAATAGTGATATTATTATACATGATTCAGTTGACTTAATAATTAATCCATTTACTCCCCGACCACATGGCTACGAAAATGGAAAGAAAACCACCAGTGTGGCTTGCAATGATAAGTTGTTGACTACTACCCAAAAAAGCTCAATACCATCCACCAAACCGACACCTGAATTATGCAATAGTGAAATGTTACCTAAACTATCCAAAAGGGGTGTCATACAATTACAAAATCTGCAAAGTAACACAATACCAAGTTCTTCTAGAAGTCCAACGAGAAGAACATTTGGTCCTGATCAGCAAAGAGATGTATTTTGGACACATAATAGGTGTAACCCTGAGTTTTCTCCAATAACTAGTCTCGAAAAGACAAGCTCCAACCTCAATTGTAGGATACAAAGTAACGCGGTTACCCCTCTTCATCTATTAGCAACCCATAAATGCCTATTTCCTACATCTTATTCTATTTTGCAAGCTTCTTCTCCACACACTCCTGGTTCAGGTATTCTAACACGCCCTTTAAAATGGAAAAAAGGTCGGTTTCTTGGACGAGGAACGTTTGGACAAGTTTTTGTGGGTTTTAACAGTGGTAGTGGTCTGATGTGTGCAATGAAGGAGGTAACCCTTTGTCCAGATGATCCTAAATCAATGGAAAGTGCAAAACAACTTCACCAAGAAGTAGTATTGCTTAGTAACTTGCGGCATCCAAATATAGTACGCTTTTATGGATCTGAGATGGTAGGTGACAAACTTTATATATACTTGGAATATGCTGCTGGTGGGTCAATATATACGTTGCTTCAACAATATGGCCAGCTTGGTGAATCTGCCATTCGTTCTTATACTGGACAAATTTTGTCCGGCCTTGCATATTTACATGCCAAATGCATTGTTCATAGGGACATCAAAGGGGCAAACATATTGGTGGATCCTAATGGGACTGTGAAATTGGCAGATTTTGGGATGGCCAAATATGTAAAGTGTTGGGAAATAAGTCGTCATCCTCGCCAATTCTCTTTAAAAGGAAGTCCTCATTGGATGGCACCGGAGATTATCATAAATCCAAGTGGTTGTAATCTTTCTGCTGATATATGGAGCCTTGGTTGCACCATTTTGGAGATGGCTACAACAAAACCACCTTGGAGCCAATATGAAAGGGCTGCTGCTTTGTTCAAACTGGGGAACACTGAAGAAATTCCTCAAGTCCCAGATTATCTATCAAAAGAAGCAAAAGACTTTGTCAAACTTTGTTTGCAAAGGGATCCACAATGTCGTCCCTCAGCTGCTCAGCTTTTGTTGCATCCTTTTATCAAAAATTTCAAACTGGAAAGATCAATTCAGGTTATTGGACCAGATAAACTTGATTCATACTTACAGTCAAAAGCAAGTGATATCTATCTGTCAAGAAATAGTTGGGGATCAAGGTCTTTCTCTCATACCCACATGATTGATAGCGCACACTTTCCCTCCTCTAGATCATTGCCTGTGAGTGGAAGGGTATCCCCCACACCAATGTGGAGTAGTGCTAATATTAAATCTGGTTCTTCTTCACTAATACTTGGCATCAGTGGTAGTGGTGCAATTTCGTTTTATCAAGCAGCAAAGTATCCAATATATAGTCCTCGCAATGCATCTGGTTCTTCTTTTACTGCATGTGGTGATACAATGCCATTACATCAAACAAAAAAGCCAACATTGTCGCATGAAGCTTTGGGTGTGATCAAAAATCTGAGTGGAAAGATGTCTTTTTCTCCAATATGTCATCCTTCTATTGCTTTGGGTGGTAGTGGTGTGATACCATATCATCAAAGCAGTAAGCAACAAACATACTCACATCAATGTTTGGGTGTTATCCAAAGGCTTCAAAATATTGCTCCTACTCTCCAAAACTCTTATGCTTTGAGGGATACAACTTCTTTTGAGAATGATTTTCTTGAAAACGATAATGCAAAGAATACTATCCAAGACGTAACTCAATCTCATCATGATGATGGCGAGGAGATATGA 2103 0.3918 ISATSKLGSTSGSKLRHHVSKRKEPIAPLSCNDNNSDIIIHDSVDLIINPFTPRPHGYENGKKTTSVACNDKLLTTTQKSSIPSTKPTPELCNSEMLPKLSKRGVIQLQNLQSNTIPSSSRSPTRRTFGPDQQRDVFWTHNRCNPEFSPITSLEKTSSNLNCRIQSNAVTPLHLLATHKCLFPTSYSILQASSPHTPGSGILTRPLKWKKGRFLGRGTFGQVFVGFNSGSGLMCAMKEVTLCPDDPKSMESAKQLHQEVVLLSNLRHPNIVRFYGSEMVGDKLYIYLEYAAGGSIYTLLQQYGQLGESAIRSYTGQILSGLAYLHAKCIVHRDIKGANILVDPNGTVKLADFGMAKYVKCWEISRHPRQFSLKGSPHWMAPEIIINPSGCNLSADIWSLGCTILEMATTKPPWSQYERAAALFKLGNTEEIPQVPDYLSKEAKDFVKLCLQRDPQCRPSAAQLLLHPFIKNFKLERSIQVIGPDKLDSYLQSKASDIYLSRNSWGSRSFSHTHMIDSAHFPSSRSLPVSGRVSPTPMWSSANIKSGSSSLILGISGSGAISFYQAAKYPIYSPRNASGSSFTACGDTMPLHQTKKPTLSHEALGVIKNLSGKMSFSPICHPSIALGGSGVIPYHQSSKQQTYSHQCLGVIQRLQNIAPTLQNSYALRDTTSFENDFLENDNAKNTIQDVTQSHHDDGEEI 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0095 700 SUPERFAMILY Protein kinase-like (PK-like) 208 537 IPR011009 -
Lal16g0095 700 MobiDBLite consensus disorder prediction 1 32 - -
Lal16g0095 700 Gene3D Transferase(Phosphotransferase) domain 1 207 499 - -
Lal16g0095 700 ProSiteProfiles Protein kinase domain profile. 208 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g0095 700 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 117 177 - -
Lal16g0095 700 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 176 578 - -
Lal16g0095 700 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 117 177 - -
Lal16g0095 700 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 176 578 - -
Lal16g0095 700 ProSitePatterns Serine/Threonine protein kinases active-site signature. 329 341 IPR008271 GO:0004672|GO:0006468
Lal16g0095 700 Pfam Protein kinase domain 209 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal16g0095 700 ProSitePatterns Protein kinases ATP-binding region signature. 214 237 IPR017441 GO:0005524
Lal16g0095 700 SMART serkin_6 208 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0095 Lal-Chr16 553788 557475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0095 117 601 MAP Kinase Kinase Kinase AT1G63700 47.575 1.57e-144 442
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lal16g0095 Pkinase 7.9e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0095 K20717 - gmx:100814422 490.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0095 16 553788 557475 Lal16g0095 16 553788 557475 ECH