Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0088 ATGGAAGAGAAGTGCATTATAAAACATATAGGAAGCAGAATTAGGGTTCTAGTGCAAGAAAGGGTGTGCGCAGAGATTCATATCGTTGCAGCCTCCACCTTTTCAATCATGATCATTTCCGAGAGGAACCGTAAGGAGATCTCCAAATACCTCTTCCAAGAGGGAGTTTGCTATGCGAAGAAGGACTTCAATCTGGCGAAGCACCCAGAAATAGATGTGCCAAATCTTCAGGTAATTAAGCTAATGCAGAGTTTCAAATCAAAGGAGTATGTGAGGGAGACATTTGCATGGATGCACTATTACTGGTTCCTCACCAATGATGGTATCGAGTTCCTTAGGACTTACCTCAATCTCCCTTCAGAGATTGTCCCTGCTACTCTGAAGAAGCAGGCTAAGCCTGCTGGCAGACCATTTGGAGGCCCACCCGGTGATCGCCCCAGGGGCCCACCACGCTTTGAAGGAGAAAGGAGATTTGGCGGTGACCGTGATGGATACCGTGGAGGACCCCGAGCACCTGGTGGTGATTTTGGAGGAGAAAAGGGTGGAGCTCCTGCTGACTACAGGCCATCTTTTGGGGGTCCTGGTGGAAGGACTGGCTTTGGTCGTGGTGCAGGTGGTGGTTATGGAGCACCATCTAATACAAATGCTTAA 651 0.4885 MEEKCIIKHIGSRIRVLVQERVCAEIHIVAASTFSIMIISERNRKEISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGERRFGGDRDGYRGGPRAPGGDFGGEKGGAPADYRPSFGGPGGRTGFGRGAGGGYGAPSNTNA 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0088 216 PANTHER 40S RIBOSOMAL PROTEIN S10 22 211 IPR037447 -
Lal16g0088 216 MobiDBLite consensus disorder prediction 127 216 - -
Lal16g0088 216 PANTHER 40S RIBOSOMAL PROTEIN S10-1-LIKE 22 211 - -
Lal16g0088 216 Gene3D - 37 140 IPR036388 -
Lal16g0088 216 MobiDBLite consensus disorder prediction 148 164 - -
Lal16g0088 216 Pfam Plectin/S10 domain 39 130 IPR005326 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0088 Lal-Chr16 524423 526725 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0088 37 191 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 85.161 1.82e-74 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0088 K02947 K09422 gmx:100797787 248.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0088 16 524423 526725 Lal16g0088 16 524423 526725 ECH
Lal16g0088 16 524423 526725 Lal15g0065 15 450136 451881 LSH
Lal16g0088 16 524423 526725 Lal23g1537 23 15508506 15512886 LSH
Lal16g0088 16 524423 526725 Lal16g1195 16 8232471 8234145 PCT