Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0087 ATGGCGATTTCTTCTCTCTCTGCTTCTGCTGCTACTTCTACTATTCTTCATCCTCTTTCTCTCTCTAACTCTTCTACTTCAAATTTTGCGTCTTTCTTCTTTCTATCTGTTCATAATGGTAACAACGCTTTCAAACCTCTTCACTCATCATCAACTAGGCTCTATGCCGCTCCTCAAGTTTTAAATTCCTCAGAATCTGTAAACCCACCTCCACAAACCCTTGATGATGAACCTGACTCCACCACCTTTCAGGTCGGAGACTCAGAGACTCGGAGTGCTTCATCCGTTAGCATCGCTGCAGATGCAGATACAATGGCACCAAAGCAGAAAATTAGAATCAAGCTTAGATCTTACTGGGTGCCCCTTATAGAGGATTCATGCAAGCAGATACTAGATGCAGCAAGGACTACCAATGCAAAAACCATGGGTCCTGTACCATTGCCTACTAAGAAGCGAATTTACTGTGTTCTTAAATCCCCACATGTGCATAAGGATGCACGGTTCCATTTTGAGATCAGAACCCATCAGCGTATCATTGATATTCTATATCCTACTGCCCAAACAATAGATTCTCTGATGCAACTTGATATTCCTGCTGGTGTTGATGTGGAGGTCAAGCTCTAA 624 0.4279 MAISSLSASAATSTILHPLSLSNSSTSNFASFFFLSVHNGNNAFKPLHSSSTRLYAAPQVLNSSESVNPPPQTLDDEPDSTTFQVGDSETRSASSVSIAADADTMAPKQKIRIKLRSYWVPLIEDSCKQILDAARTTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRIIDILYPTAQTIDSLMQLDIPAGVDVEVKL 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0087 207 SUPERFAMILY Ribosomal protein S10 110 207 IPR036838 -
Lal16g0087 207 PRINTS Ribosomal protein S10 family signature 110 123 IPR001848 GO:0003735|GO:0005840|GO:0006412
Lal16g0087 207 PRINTS Ribosomal protein S10 family signature 145 160 IPR001848 GO:0003735|GO:0005840|GO:0006412
Lal16g0087 207 PRINTS Ribosomal protein S10 family signature 166 180 IPR001848 GO:0003735|GO:0005840|GO:0006412
Lal16g0087 207 PANTHER BNAC05G40270D PROTEIN 8 207 - -
Lal16g0087 207 SMART Ribosomal_S10_2 112 206 IPR027486 -
Lal16g0087 207 Gene3D Ribosomal protein S10 domain 97 207 IPR036838 -
Lal16g0087 207 TIGRFAM rpsJ_bact: ribosomal protein uS10 109 206 IPR001848 GO:0003735|GO:0005840|GO:0006412
Lal16g0087 207 Pfam Ribosomal protein S10p/S20e 112 206 IPR027486 -
Lal16g0087 207 PANTHER 30S RIBOSOMAL PROTEIN S10 FAMILY MEMBER 8 207 IPR001848 GO:0003735|GO:0005840|GO:0006412
Lal16g0087 207 Hamap 30S ribosomal protein S10 [rpsJ]. 108 207 IPR001848 GO:0003735|GO:0005840|GO:0006412
Lal16g0087 207 MobiDBLite consensus disorder prediction 62 98 - -
Lal16g0087 207 ProSitePatterns Ribosomal protein S10 signature. 134 149 IPR018268 GO:0003723|GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0087 110 205 Cytoplasmic Ribosomal Protein Gene Family AT5G62300 32.990 6.67e-09 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0087 K02946 - qsu:111986192 276.559