Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0086 ATGAAGTTATCAGTTTTTGAAGTTTTGCATTTGGGTTTTCCAATTTTGTTGTTGGTGTACATTATTCAGGTGCATGGTGTTAGTGGCCATGCTAAAAACTTCATCACTTGGGATGACCTCATGGTTGATGAGCATACTCTGGCTTCAGATATTGGTGGTAAAGTTATAGTGGTAGATCAGGGTGGTAATGGAGATTCAACAACTGTTCAAGGGGCTGTGGAGTTGGTTCCTGAACACAACACAGAAAGGGTGAAGATTTATATTTATCCTGGAACATACAGAGAAAGAGTGCATGTGCCAAAAAGCAAGGCGTTTATCTCATTTATAGGTAAACCAAATATAACAGGGAATGCTAATGTGAATGCACTAAATATAAGTGAGATAGGAAATGCCATTCCTACAATCACAAATAGTACAAAGGCATCAGACAAAGGCTCAGATGGCCAAGAAATGGGCACAGTTAGTACATCAACAGTATGGGTTGAATCTGATTTCTTCTGTGCAACTGCTCTTACCATTCAGAATTTGGTAGACAGAGATGCCGATAAACGTCAAGCAGTGGCATTGCGGGTAGATGGTGATAAAGCTGTATTCTACAGAGTTAGGCTGGTAGGGGAGCAAGACACTCTCCTAGATAACAATGGAACTCACTATTTCTACCGAAGTTACATTCAAGGATCGGTTGATTTTATATTTGGCCAAGCAAAATCATTGTTTCATGAGTGTATAATATACTCAGTAGCAGAGTTTTGGGGTGCAATTGCAGCTCATCACAGGAACTCAGTAGATGAAGATACAGGATTTTCATTTGTTGGTTGCACAATCAAGGGAAATGGTAGTGTCTTACTTGGGAGAGCTTGGGGAGACTATGCAACAACAGTATATTCCAATTGTTACATGGATGATATCATTAGCCCACTGGGATGGAGTGATTGGAATGTTCCATCCAGACAGAGAACTGCTATGTTTGGAGAGTACCAGTGTTCTGGAAAAGGATCAAATAGAACTGGGAGGGTAGAATGGTCCAAAGCTTTAAAGAGTGAAGAAGCAAAGCCTTTCCTTGGGAGAGATTACATATATGGAGACACATGGCTTAAACTACAGTAG 1107 0.4038 MKLSVFEVLHLGFPILLLVYIIQVHGVSGHAKNFITWDDLMVDEHTLASDIGGKVIVVDQGGNGDSTTVQGAVELVPEHNTERVKIYIYPGTYRERVHVPKSKAFISFIGKPNITGNANVNALNISEIGNAIPTITNSTKASDKGSDGQEMGTVSTSTVWVESDFFCATALTIQNLVDRDADKRQAVALRVDGDKAVFYRVRLVGEQDTLLDNNGTHYFYRSYIQGSVDFIFGQAKSLFHECIIYSVAEFWGAIAAHHRNSVDEDTGFSFVGCTIKGNGSVLLGRAWGDYATTVYSNCYMDDIISPLGWSDWNVPSRQRTAMFGEYQCSGKGSNRTGRVEWSKALKSEEAKPFLGRDYIYGDTWLKLQ 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0086 368 PANTHER PECTINESTERASE QRT1 18 367 - -
Lal16g0086 368 SUPERFAMILY Pectin lyase-like 54 366 IPR011050 -
Lal16g0086 368 ProSitePatterns Pectinesterase signature 2. 224 233 IPR033131 -
Lal16g0086 368 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 18 367 - -
Lal16g0086 368 Pfam Pectinesterase 56 362 IPR000070 GO:0030599|GO:0042545
Lal16g0086 368 Gene3D - 54 368 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0086 Lal-Chr16 515929 518208 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0086 1 319 Carbohydrate Esterase AT5G55590 51.437 9.53e-115 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0086 K01051 - gmx:100812850 587.415