Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0084 ATGAACGATACAGATGTCTCCAAGCAAATCCAGCAAATGGTGCGTTTTATCCACCAAGAAGCTGAAGAGAAAGCCAACGAGATCTCTGTCTCCGCCGAAGAAGAATTCAACATCGAGAAGTTGCAGTTGGTTGAAACCGACAAGAAGAAGATCCGCCAAGAGTACGAGCGCAAAGAAAAGCAAGTTGATATTCGCAAGAAGATTGAGTACTCAATGCAATTGAATGCTTCTCGGATAAAAGTTCTCCAGGCTCAAGATGACGTTGTTAATAACATGAAAGATGCTGCGGCCAAGGAACTTTTGAATGTGAGCGGTGATCATAATGTGTACAGAGATATTCTAAAGGATCTCATAGTTCAGATGGCACTGAACACTGTCTTTGCTACCGTTTGTTTGATGTTATGGGTTCACTCCCCAGTTTCCACCCATCCCGTTTCCTTTCCGATTTTCCAGAGTTTGCTGAGGCTGAAAGAGCCTTCTGTCTTATTGAGATGCCGGGAAGATGACCTCCAATTGGTAGAGTCTGTGTTGGATTTAGCTGTCCAGGAATACGCTGAAAAAGCAAATGTTCATTCACCAGAGATTCTTGTTGACAAGGAAGTCTATCTTCCACCTGCACCCAGCGATGATAATTCACATGCTCTCCACTGCTCTGGAGGGGTGGTCATGGCTTCTCGAGATGGAAAAATTGTGTTTGAAAATACGCTTGATGCAAGGTTGGATGTGGTGTTCCGTAAGAATCTTCCGGAGATCCGCAAGCAGCTCTTTGGAGGAGCTGCTGCTTGA 786 0.4478 MNDTDVSKQIQQMVRFIHQEAEEKANEISVSAEEEFNIEKLQLVETDKKKIRQEYERKEKQVDIRKKIEYSMQLNASRIKVLQAQDDVVNNMKDAAAKELLNVSGDHNVYRDILKDLIVQMALNTVFATVCLMLWVHSPVSTHPVSFPIFQSLLRLKEPSVLLRCREDDLQLVESVLDLAVQEYAEKANVHSPEILVDKEVYLPPAPSDDNSHALHCSGGVVMASRDGKIVFENTLDARLDVVFRKNLPEIRKQLFGGAAA 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0084 261 PANTHER BNAC03G72900D PROTEIN 149 251 - -
Lal16g0084 261 PANTHER BNAC03G72900D PROTEIN 1 123 - -
Lal16g0084 261 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 149 251 IPR002842 GO:0033178|GO:0046961|GO:1902600
Lal16g0084 261 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 123 IPR002842 GO:0033178|GO:0046961|GO:1902600
Lal16g0084 261 Coils Coil 41 61 - -
Lal16g0084 261 Pfam ATP synthase (E/31 kDa) subunit 149 256 IPR002842 GO:0033178|GO:0046961|GO:1902600
Lal16g0084 261 Pfam ATP synthase (E/31 kDa) subunit 16 124 IPR002842 GO:0033178|GO:0046961|GO:1902600
Lal16g0084 261 Gene3D - 1 62 - -
Lal16g0084 261 Gene3D - 147 260 IPR038495 -
Lal16g0084 261 SUPERFAMILY V-type ATPase subunit E-like 149 257 - -
Lal16g0084 261 Hamap V-type proton ATPase subunit E [atpE]. 8 257 IPR002842 GO:0033178|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0084 Lal-Chr16 507391 510794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0084 1 261 Primary Pumps ATPases(2) AT4G11150 67.433 7.00e-120 340
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0084 K02150 - qsu:112031179 366.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0084 16 507391 510794 Lal16g0084 16 507391 510794 ECH
Lal16g0084 16 507391 510794 Lal15g0135 15 952890 955135 LSH
Lal16g0084 16 507391 510794 Lal23g1387 23 14508929 14511223 LSH