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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Lal16g0061
ATGGACATAGGTTCCAATTCAACCCAAACCGGTGCTGCTACTTCTGCATACAGAGGTGTACGCAAAAGAAAATGGGGGAAATGGGTCTCTGAAATTCGTGAACCTGGCACCAAAACCAGAATCTGGTTAGGTAGCTTCCAGACTCAGGAGATGGCTGCAGCTGCATACGACATGGCAGCATTGCATTTCCGGGGCAAAGAAGCGAGGCTCAACTTCCCTGAACTTGCAGCCGCGCTTCCTCGCCCCGTGAGTAACAATGCTGACCACATTCGCATGGCTGCACACGAGGCGGCCCTAAGGTTCAGGACTAATTCACACCTGATCACAGAGCCTGGTGGTGATGGTGGTGGTGGTGGTGATAACGGTGGTTCTTCATCTAATTCAGCTGGGAGAGTAAGACTCTCCCCTAGTCAGATTCAGGCCATCAATGACTCGCCTCTGGACTCACCCAATATGTGGTTGCAAACACCAGATACTTTCATGTTGGATGATGAGTCTATGATGTTTGCTAATAATGATTATGACTATAAGCTCTTTGATGAGGAGGAGAATGAGTGGGAGAATATGCACACTACTTCTCTATGGGATCCTTAG
594
0.4882
MDIGSNSTQTGAATSAYRGVRKRKWGKWVSEIREPGTKTRIWLGSFQTQEMAAAAYDMAALHFRGKEARLNFPELAAALPRPVSNNADHIRMAAHEAALRFRTNSHLITEPGGDGGGGGDNGGSSSNSAGRVRLSPSQIQAINDSPLDSPNMWLQTPDTFMLDDESMMFANNDYDYKLFDEEENEWENMHTTSLWDP
197
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Lal16g0061
197
MobiDBLite
consensus disorder prediction
106
133
-
-
Lal16g0061
197
Pfam
AP2 domain
16
65
IPR001471
GO:0003700|GO:0006355
Lal16g0061
197
PRINTS
Ethylene responsive element binding protein signature
17
28
IPR001471
GO:0003700|GO:0006355
Lal16g0061
197
PRINTS
Ethylene responsive element binding protein signature
55
75
IPR001471
GO:0003700|GO:0006355
Lal16g0061
197
Gene3D
AP2/ERF domain
16
74
IPR036955
GO:0003700|GO:0006355
Lal16g0061
197
SUPERFAMILY
DNA-binding domain
15
74
IPR016177
GO:0003677
Lal16g0061
197
ProSiteProfiles
AP2/ERF domain profile.
16
73
IPR001471
GO:0003700|GO:0006355
Lal16g0061
197
SMART
rav1_2
16
79
IPR001471
GO:0003700|GO:0006355
Lal16g0061
197
CDD
AP2
15
75
IPR001471
GO:0003700|GO:0006355
Lal16g0061
197
PANTHER
ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED
8
196
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Lal16g0061
Lal-Chr16
372052
372645
Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Lal16g0061
15
197
AP2-EREBP Transcription Factor Family
AT1G71450
55.191
3.90e-60
184
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
AP2 or ERF-ERF
Lal16g0061
AP2
2.1e-12
CL0081
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Lal16g0061
-
-
gmx:100801245
260.766
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Lal16g0061
16
372052
372645
Lal15g0040
15
310206
310760
LSH
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