Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal16g0031 ATGGACACTCCTCACAGCAATCAGATCAACTCTCCTCTTCATCCCAACTTCTCTCCATTTCAGGATTCACCTGTATTCAACTTTATCAACAGTTTATCTCCTATAAAACCTGTTAAGCCTGTTCCCATTTCTCACACTTTCAACTCACTTACATGTTCATCTCCTCCATCCATTTTCACATCACCACATGTCTCCTCACTCAAGGATTCCAGATTCCTAAGAAGACATATCCCGGTGGACACATTAAAGCCTACAGATTCATCTTTAGAAGTACATAAAATGTATTCAAATGAAGAGCCTCTTGCAGATTCAACTCCTCTACATCATAACTTGACCAAATTTCAGGATAATACTGCTCAAGGGATTTCCACAGGAGAAGCTGCAATCGAGCTGCCACAATCCTTAAAGTATAATTGTGGTAGCCCTGGATATGATGCAACACTTTGCGTTGATGAGGCGAACATCCTTCTGGAGTTGCCTACTGAGGCAGCATCAGATGTTACCTTTGTTCAAAAACAAGGCTGTAAAACAAACTCAGTTGAGAGCCAAGTTCTTTGTCAGGGAACTTGTCAAATTGAGCCAAAGAGTGAACTCCAAGAGTCTATTTGGGATGGTTTAAGTCCTAGTCCCGCTAATCTGTTTATTTTTAATTCACCAAATGAAGCAGGAGCTTTTAATAGCCTATTTCAAAAACCCTTGGACTCTTCTGTTGATTTTATGTCCCTGTTACCGCAATCTACCATCAATAATGGTCGGAATGTGCAATTGGTTCATACTATTGTTTCTGGTTTTGAACATGAAAATGAAGATCATCATTCTGATCCAGTAGCAGCCACAGAAACAGACCATGCAGTGGACGATGTTGCCATGAGTAGCAATCCAAATGAGAAAACAGATAATGAGCTTGTTCCTGTGATGCACCGTGGTCTGCGGAGGCGCTGTCTAGACTTTGAGATGGCCAGTGTAAGGCAGAAGAAATCAGATGATTATTCAAAGACAGATTCCAGTACTTCACAATCTGGTGGAAGGAATGTTGCTAATGAAAAGCATCTCATTCCTACAGAGCAGATTAGTGTTTCACGAAATTGCATTTTGCCGGGAATCGGTTTACACTTGAATGCACTTGCAACCTTAAAAGATCACAACAGCATAACAAAGGGAAAGTTTTCCTCTGGAAGACAAGGCACTCTGCTATGTTCCACTTCTTCGTTGCAAATCTCTACAAGCCAAGAACATCACCATCTATCCGTGGTTGCTGTGCCATCTGAAAGAGAATTTGATTTGTCAAACAATGATGTTCAGCCTGGTGATGATTGTCCCCAGGCATCAGCTTACATGGCTCGTGAAGATCCCATTTCGAATAGCCCCAAAAAGAAAAGGAAACTGACACCAAATTTAATTTGCAGACATAAGTCAGACCCAGCTGGAGAAACCGAGGGCTGCAAGCGTTGTAATTGCAAGAAATCAAAGTGTTTGAAGCTTTATTGTGAGTGCTTTGCTGCTGGTGTCTACTGCATTGAACCTTGCTCCTGTCAGGACTGCTTCAACCAAGCTATTCATGAAGATACTGTTCTTCAAACTCGCAAGCAGATTGTGTCTCGGAACCCTCTTGCATTTGCTCCTAAAGTCATCAGAAGTTCCGAGTCTGTGCCTGACGTTGGGGGTGATCCAAATAAAACTCCAGCTTCAGCACGACATAAAAGAGGATGCAACTGCAAGAAATCAAGCTGCCTAAAGAAATATTGTGAATGTTATCAGGGTGGTGTTGGTTGCTCCATCAGCTGTAGATGTGAAGGGTGCAAGAATGCTTTTGGTAGAAAGGATGGTTCTGCTGTTGTAGATGCTTGGTCAGAAGAAGAGACTGGAGCACGCGAAAAGAATGTGGCAAAAAAAGCTTTGCAGAAAACTGAAAGTCAGAATATTGAAGATCATTCAGACTCTGCTCTTGTCGCAACACCATCACTGCTTTCCAGGACATTGCTTCCATTGCCCTTTTCATCCAACGGAAAGCCACCAAGATCTTTTGTCACAACCATCTCCAGTTCTGCATTGTTTGCCAGCAGCCAAAAGCTTGGGAAACCAAATTCTCTTTGGTCTCAATCTAAGCATGCTCAAACTGTTCCGGATGATGAAATCCCGGATGCTCTCTGCAGTGATAACTCTCCTGTCACTTGCATCAAAACTTCTTCTCCGAAAGGAAAGAGGATATCTTCTCCCAAGTGTGACTTGGGGTCCTCTCCGAGTCGCAAAGGTGGCAGGAAGTTGATATTGCAATCCATCCCTTCATTTCCTTCCCTAGCCAATCAGCAGTAG 2313 0.428 MDTPHSNQINSPLHPNFSPFQDSPVFNFINSLSPIKPVKPVPISHTFNSLTCSSPPSIFTSPHVSSLKDSRFLRRHIPVDTLKPTDSSLEVHKMYSNEEPLADSTPLHHNLTKFQDNTAQGISTGEAAIELPQSLKYNCGSPGYDATLCVDEANILLELPTEAASDVTFVQKQGCKTNSVESQVLCQGTCQIEPKSELQESIWDGLSPSPANLFIFNSPNEAGAFNSLFQKPLDSSVDFMSLLPQSTINNGRNVQLVHTIVSGFEHENEDHHSDPVAATETDHAVDDVAMSSNPNEKTDNELVPVMHRGLRRRCLDFEMASVRQKKSDDYSKTDSSTSQSGGRNVANEKHLIPTEQISVSRNCILPGIGLHLNALATLKDHNSITKGKFSSGRQGTLLCSTSSLQISTSQEHHHLSVVAVPSEREFDLSNNDVQPGDDCPQASAYMAREDPISNSPKKKRKLTPNLICRHKSDPAGETEGCKRCNCKKSKCLKLYCECFAAGVYCIEPCSCQDCFNQAIHEDTVLQTRKQIVSRNPLAFAPKVIRSSESVPDVGGDPNKTPASARHKRGCNCKKSSCLKKYCECYQGGVGCSISCRCEGCKNAFGRKDGSAVVDAWSEEETGAREKNVAKKALQKTESQNIEDHSDSALVATPSLLSRTLLPLPFSSNGKPPRSFVTTISSSALFASSQKLGKPNSLWSQSKHAQTVPDDEIPDALCSDNSPVTCIKTSSPKGKRISSPKCDLGSSPSRKGGRKLILQSIPSFPSLANQQ 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal16g0031 770 MobiDBLite consensus disorder prediction 695 770 - -
Lal16g0031 770 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 482 517 IPR005172 -
Lal16g0031 770 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 568 603 IPR005172 -
Lal16g0031 770 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 1 768 IPR044522 GO:0003700
Lal16g0031 770 SMART CXC_2 479 520 IPR033467 -
Lal16g0031 770 SMART CXC_2 565 606 IPR033467 -
Lal16g0031 770 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 1 768 - -
Lal16g0031 770 MobiDBLite consensus disorder prediction 333 349 - -
Lal16g0031 770 MobiDBLite consensus disorder prediction 721 735 - -
Lal16g0031 770 MobiDBLite consensus disorder prediction 325 349 - -
Lal16g0031 770 ProSiteProfiles CRC domain profile. 480 605 IPR005172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal16g0031 Lal-Chr16 205264 209346 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal16g0031 20 769 CPP Transcription Factor Family AT4G14770 40.996 9.59e-141 427
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Lal16g0031 TCR 1.9e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal16g0031 - - gmx:100804447 988.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0031 16 205264 209346 Lal23g1612 23 15988922 15993092 LSH