Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1629 ATGGCTTTCTTCCAAGCAAATTTCATGCTTCATCACCAAGATGACCATTATCATCATCAACCTTTACCTCCACTCAACTCTATTCTAACCTCATGTGCACCTCAAGACTACAACAACCATGGTGGAGCTCATGCTTTTCTTGGGAAGAGATCTATGTCATTCTCAGGGATTGAAGTTGGAAGAGGAGGAGAAGATGGTAATATTAATAACAATAATGGTGAGGAATATTTGTCAGATGATGATGGATCACAGGCTGGTGGAGAGAAGAAGAGGAGGCTTAACATGGAACAAGTGAAGACACTTGAGAAGAGTTTTGAGTTAGGGAACAAGCTTGAACCAGAGAGGAAAATGCAACTGGCAAGGACACTTGGATTGAAACCTAGACAGGTTGCTATATGGTTCCAGAACAGGAGGGCTAGGTGGAAAACCAAGCAGTTGGAAAAGGACTATGATCTTCTTAAAAGACAATATAATGCTATTAAGGCTCATAATGAGGCTCTTCAAGCTCACAACCAAAAACTTCAGTCCGAGATATTGGCACTGAAAAGTAGAGAGCCAACTGAGTCAATAAACCTGAATAGAGAAAGAGAGGGATCAAGCAGCATTAGAAGTGAGAACAGCTCAGAGATTAAGTTGGATATGTCAAGGACAACACCAGCTATTGAGAGTCCTCACCACCAAAGGATCCTCTTTCCATCATCCTCTATTAGACCAGACCTTCAGCTTTTCCAAACTACTTATTCAAAGATTGATCACATCATCAAAGAAGAGAGCTTCAGCAACATGTTTTGTTCCATTGATGATCAATCTAGCTTATGGCCATGGTTGGAGCACCAAACTTTCAATTAA 849 0.4087 MAFFQANFMLHHQDDHYHHQPLPPLNSILTSCAPQDYNNHGGAHAFLGKRSMSFSGIEVGRGGEDGNINNNNGEEYLSDDDGSQAGGEKKRRLNMEQVKTLEKSFELGNKLEPERKMQLARTLGLKPRQVAIWFQNRRARWKTKQLEKDYDLLKRQYNAIKAHNEALQAHNQKLQSEILALKSREPTESINLNREREGSSSIRSENSSEIKLDMSRTTPAIESPHHQRILFPSSSIRPDLQLFQTTYSKIDHIIKEESFSNMFCSIDDQSSLWPWLEHQTFN 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1629 282 MobiDBLite consensus disorder prediction 189 210 - -
Lal15g1629 282 Pfam Homeodomain 89 142 IPR001356 GO:0003677
Lal15g1629 282 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 1 282 IPR045224 GO:0003700
Lal15g1629 282 MobiDBLite consensus disorder prediction 59 94 - -
Lal15g1629 282 PRINTS Lambda-repressor HTH signature 115 124 IPR000047 GO:0003677
Lal15g1629 282 PRINTS Lambda-repressor HTH signature 124 140 IPR000047 GO:0003677
Lal15g1629 282 Coils Coil 136 184 - -
Lal15g1629 282 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-13 1 282 - -
Lal15g1629 282 Pfam Homeobox associated leucine zipper 144 184 IPR003106 GO:0006355|GO:0043565
Lal15g1629 282 Gene3D - 81 150 - -
Lal15g1629 282 ProSitePatterns 'Homeobox' domain signature. 119 142 IPR017970 GO:0000981|GO:0006355
Lal15g1629 282 SUPERFAMILY Homeodomain-like 81 146 IPR009057 -
Lal15g1629 282 CDD homeodomain 89 145 IPR001356 GO:0003677
Lal15g1629 282 ProSiteProfiles 'Homeobox' domain profile. 84 144 IPR001356 GO:0003677
Lal15g1629 282 SMART HOX_1 87 148 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1629 Lal-Chr15 18092519 18096774 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g1629 1 282 Homeobox Transcription Factor Family AT1G69780 56.146 1.30e-99 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lal15g1629 Homeodomain 6e-16 CL0123