Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1621 ATGGCTCGTTCTATTCCTTTAGTTTCCACCATTTTCGTCATTCTTTTGCTTCTCTTGACCACCGGAATGGTGGCAGAAGCAAAAACTTGTGAGAGTAGGAGCCACAAACTAAAAGGATTTTGTTATTCTAGCAAGCGTTGTGCTCATGTTTGCACTTCTCATCACAACTTTATTGGAGGACATTGTCGTGGCTTCATTCGTAGATGTCATTGTACCAAACCTTGTTAG 228 0.4123 MARSIPLVSTIFVILLLLLTTGMVAEAKTCESRSHKLKGFCYSSKRCAHVCTSHHNFIGGHCRGFIRRCHCTKPC 75
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1621 75 Gene3D - 23 75 IPR036574 -
Lal15g1621 75 SMART gth_4 29 75 IPR003614 GO:0006952
Lal15g1621 75 PANTHER DEFENSIN-LIKE PROTEIN 1 1 75 - -
Lal15g1621 75 PANTHER DEFENSIN-LIKE PROTEIN P322 1 75 - -
Lal15g1621 75 SUPERFAMILY Scorpion toxin-like 27 75 IPR036574 -
Lal15g1621 75 Pfam Gamma-thionin family 28 75 - -
Lal15g1621 75 PRINTS Purothionin signature 29 44 IPR008176 GO:0006952
Lal15g1621 75 PRINTS Purothionin signature 60 74 IPR008176 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1621 Lal-Chr15 18024614 18025027 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g1621 1 75 Plant Defensins Gene Families AT2G02100 46.154 3.04e-20 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1621 - - cam:101490338 87.8113