Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1619 ATGACTGTGGATAAAGTTGGTAGTAGCTCTGAGTGGAGCTTAGAGCAAGATAAAGCATTTGAAAATGCTTTGGCAACTCATCCCGAGGACGCTTCAGATCGATGGGAGAAGATTGTAGTCGATGTACCAGGGAAAACTTTAGAAGAGATTAAACATCACTATGAGCTATTGGTTAATGACATTAACCAGATCGAATCTGGTTGTGTGCCTCTGCCATCTTATCATTCTTCTCCTGAGGGCTCAACAAGCCATGCGAGCGATGAAGGAGCTGACAAGAAGGGAAGCCGTCTGTGGAACTATAACAATGAGTCTAATCCTAAGGTTTCAAAATCTGATCAAGAACGACGAAAGGGTATTGCCTGGACCGAGGAAGAACACAGGTTATTTCTTATTGGTTTGGAGAAGTATGGAAAAGGTGATTGGAGAAGTATATCTAGGAACTATGTGGTAACAAGGACACCTACACAAGTAGCAAGCCATGCCCAAAAATACTTCATTCGTCTGAACTCGATGAATAAAGATAGAAGGCGATCCAGCATACACGATATCACAAGTGTGAACAATGGAGACGTCTCAGCAGCTCTAGGATCAATTACCAGTCAAACAAATGGTCCTTACAGAAATTCTACAGGAAAATTAACCAAACAAAGTCCTCCAACCCCAACTGGAGCCTCGGGTGTAGGACTATATGGTCCTCCGACTATAGGGCAGCCTATAGGAGGAGGATCCCTTGTATCTGCAGTTGGCACAGCAGTGAGTCTTCCTCCCCCTCATATGGCTTACGGTGTTCGAGCTGCGGTTGATGGTGCTGTTGTTCCTGGTGCACCAATGAACTTTGGTCATATGCCATACCACATGGCACAACCTCATAGATGA 876 0.4463 MTVDKVGSSSEWSLEQDKAFENALATHPEDASDRWEKIVVDVPGKTLEEIKHHYELLVNDINQIESGCVPLPSYHSSPEGSTSHASDEGADKKGSRLWNYNNESNPKVSKSDQERRKGIAWTEEEHRLFLIGLEKYGKGDWRSISRNYVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVNNGDVSAALGSITSQTNGPYRNSTGKLTKQSPPTPTGASGVGLYGPPTIGQPIGGGSLVSAVGTAVSLPPPHMAYGVRAAVDGAVVPGAPMNFGHMPYHMAQPHR 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1619 291 PANTHER TRANSCRIPTION FACTOR KUA1 7 281 - -
Lal15g1619 291 CDD SANT 11 58 IPR001005 -
Lal15g1619 291 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 112 169 IPR017930 -
Lal15g1619 291 MobiDBLite consensus disorder prediction 198 227 - -
Lal15g1619 291 CDD SANT 120 165 IPR001005 -
Lal15g1619 291 ProSiteProfiles Myb-like domain profile. 10 58 IPR001005 -
Lal15g1619 291 ProSiteProfiles SANT domain profile. 121 169 IPR017884 -
Lal15g1619 291 MobiDBLite consensus disorder prediction 72 115 - -
Lal15g1619 291 SUPERFAMILY Homeodomain-like 10 66 IPR009057 -
Lal15g1619 291 SMART sant 117 167 IPR001005 -
Lal15g1619 291 SMART sant 8 60 IPR001005 -
Lal15g1619 291 ProSiteProfiles Myb-like domain profile. 113 165 IPR001005 -
Lal15g1619 291 Gene3D - 119 171 - -
Lal15g1619 291 MobiDBLite consensus disorder prediction 198 223 - -
Lal15g1619 291 SUPERFAMILY Homeodomain-like 115 170 IPR009057 -
Lal15g1619 291 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 117 167 IPR006447 GO:0003677
Lal15g1619 291 Pfam Myb-like DNA-binding domain 10 54 IPR001005 -
Lal15g1619 291 Pfam Myb-like DNA-binding domain 120 165 IPR001005 -
Lal15g1619 291 Gene3D - 4 71 - -
Lal15g1619 291 PANTHER HOMEODOMAIN-LIKE TRANSCRIPTIONAL REGULATOR-RELATED 7 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1619 Lal-Chr15 18006264 18009975 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lal15g1619 Myb_DNA-binding 1.5e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1619 - - gmx:100820272 457.218