Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1614 ATGTCAATGTGTGGTGCACTTTCCTCCACTACTTCTCACCTCATTACCCTCACTTCTTCTCTCCCTCTCACATTTCCCTTCACTTTCAGGGATACCATTAACCCATTCCACTCATTCTCACCAAGGCCTCCCACACTTTTAGTAAAATCAAAGGCTACTACTACACATACACCTTCTGATATGAAAGCATGGGTGTATGGTGAATATGGGAGTGTGGATGTGTTGAAGTTTGAGTCCAATGTTGCTGTCCCTCATCTTAATGAGGATCAGGTTCTTCTCAAAGTTGTTGCTGCTGCTCTTAATCCTGTTGATTTCAAGAGAAGGCAGGGCAAGTTCAAACCCACTGATTCTCCACTTCCGACTGTTCCGGGCTATGATGTTGCTGGTGTGGTGGTGAAGATTGGTAGTAAAGTAAAGGACTTTAAAGTGGGAGATGAAGTATATGGTGATATAAATGAGAAAGCACTAGAAGGGCCAAAGCAGTTTGGGTCTCTGGCTGAGTACACAGCTGTTGAGGAGAAATTGTTGGCACCAAAACCTCAAAACTTGGATTTTGCTCAAGCTGCTTCTCTTCCTCTTGCAATTGAGACTGCTTATCAGGGTTTGGAGAAGACTGGATTTTCACCTGGTAAATCTATTCTTGTTCTAAATGGTTCTGGTGGAGTTGGGAGTCTAGTCATTCAGCTAGCTAAGCAAGTTTTTGGAGCTTCAAGAGTTGCTGCCACTTCAAGCACTAGAAATTTGGAGCTATTGAAAAGCTTGGGAGCTGATTTGGCTATTGACTACACAAAGGAGAACTTTGAAGAGTTGCCAGAAAAATTCGATGTAGTTTATGATGCCATTGGACAATGTGAAAAAGCAGTGAAGGCAATTAAAGAAGGTGGGAGTGTGGTAGCACTTACAGGTTCTGTTACACCACCTGGCTTCAGATTTGTAGTTACTTCAGATGGAGCTGTTCTCAGGAAACTAAATCCTTATTTAGAGAGTGGGAAAGTGAAGCCAATATTAGACCCTAAAGGTCCATTCACATTTCCACAACTTGTTGAAGCCTTCTCTTATCTTGAAACAAACAGAGCTATAGGAAAGGTTGTTATACATCCAATCCCATGA 1110 0.4225 MSMCGALSSTTSHLITLTSSLPLTFPFTFRDTINPFHSFSPRPPTLLVKSKATTTHTPSDMKAWVYGEYGSVDVLKFESNVAVPHLNEDQVLLKVVAAALNPVDFKRRQGKFKPTDSPLPTVPGYDVAGVVVKIGSKVKDFKVGDEVYGDINEKALEGPKQFGSLAEYTAVEEKLLAPKPQNLDFAQAASLPLAIETAYQGLEKTGFSPGKSILVLNGSGGVGSLVIQLAKQVFGASRVAATSSTRNLELLKSLGADLAIDYTKENFEELPEKFDVVYDAIGQCEKAVKAIKEGGSVVALTGSVTPPGFRFVVTSDGAVLRKLNPYLESGKVKPILDPKGPFTFPQLVEAFSYLETNRAIGKVVIHPIP 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1614 369 SUPERFAMILY GroES-like 58 215 IPR011032 -
Lal15g1614 369 Pfam Zinc-binding dehydrogenase 254 365 - -
Lal15g1614 369 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 210 231 IPR002364 GO:0008270|GO:0016491
Lal15g1614 369 Gene3D - 202 316 - -
Lal15g1614 369 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 49 369 - -
Lal15g1614 369 CDD MDR_like_2 61 365 - -
Lal15g1614 369 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 183 302 IPR036291 -
Lal15g1614 369 SMART PKS_ER_names_mod 70 365 IPR020843 GO:0016491
Lal15g1614 369 Gene3D - 68 365 - -
Lal15g1614 369 Pfam Alcohol dehydrogenase GroES-like domain 89 151 IPR013154 -
Lal15g1614 369 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 49 369 IPR044626 GO:0016628
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1614 Lal-Chr15 17964179 17966146 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g1614 88 257 Monolignol Biosynthesis Gene Families AT4G37980 28.426 8.40e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1614 K18980 - gmx:100810816 567.77