Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal15g1612 ATGGATCTAAAGAAGGAGAAAAATGATACAACAAATGATTCTTCTTCTTCTTCTTCTCCTATAACAAAGTTTTCAACATCCAAAACAAGTAAAAATATTCCAAAGAAGCATTTCCATCCCATTAACAATGAGTCTCCTTCTCCAAAGGATTCACCTCCAACACCAAACCCTGATGACAAATCAGTTTCTCCAGAAACTGCTCCGTTGAAACCGCCACCTTCTCCACCACCACCACCGGTTTTGTTGAAGTCTCCACCACCACCACCCTCATTACCACCACCACCACCCTCATTACCACCTCTACCCTCTTTGCCGCCACCACCATCGCCTCCTCCTCCACCATTATTACCCTCTCCGCCGCCACCATTACCTGCCTTTCCACCACCACCACCCCCTCCGTCGCAACGCGTACCACCACCACGGTCCCAGATAAATAATTCTTCTTCTCCTTCTCCGGCTCAAAATAAAACTCCTCCTCCTCCTTTACCACCCTCACGTAAGGATGCACCTTCAAATGATTCTTCAACCAAGTCACCCTTCTCTCCAGTTCCAACACCTTCAGGGTCAAAAAACCAAACCACGCAAGGTGGTGGTGGTGGTGGTGGGTCCCATGCAAAACCGGGTGGTTCTTCTTCTTCTTCTTCTCAAGCTTCCTCAGGTGGTGATAATAATCCAGGAAAATATGTTGGTTATGCACTTGCTGGGGTTTTTGTTCTTGGTTTAGTTGCTTTAGCATTGTTTTTCACGTATAGGAGGAAGAGAACAAAAGGGGACCCCTTTGTTGCAACCTACATTCATGCAAAATCAGGTACTAATATGCAATACTATGCACAGCAGCCACAATCTCCACATGGAAACAACTATGGAAATGGGAGCATGAAACATATAGGAGGAAGTTCTTTAGACACTGCTCAGCCCAAAAGTGCTCAAATAGCTTTTACCTATAACATGGTTATGGAAATGACCAAAGCATTTTCTAGTGAAAATGTTATAGGTGAAGGTGGATTTGGGTGTGTTTACAAGGGTTGGCTACATGAGGGAAGAGCAGTTGCAGTTAAGCAACTTAAAGCTGGAAGTGGACAAGGAGAGAGGGAATTTCAGGCTGAAGTTGAGATTATAAGTCGTGTTCATCATCGCCATTTGGTGTCATTAGTTGGTTATTGCATATCTGAGCAGCAAAGAATGCTTATCTATGAGTTTGTTCCCAATGGAACACTCCATCATCACTTGCATGGAAGTGGAATGCCAGTTCTGGATTGGGCCAAGAGGCTGAAGATAGCAATCGGAGCTGCAAAAGGCTTGGCATATCTGCATGAGGACTGCAGCCAAAAGATTATTCACAGAGATATTAAGTCAGCAAATATACTTTTGGACAATGCTTTTGAAGCACAGGTTGCAGACTTTGGACTTGCAAAGCTTGCAGATGCTGGTAACACCCATGTATCAACTAGGGTTATGGGCACCTTTGGATACATGGCTCCAGAATATGCAACAAGTGGAAAATTAACGGATAGATCAGATGTTTTTTCATTTGGGGTTGTCCTCCTTGAGCTTGTAACTGGAAGGAAACCAGTTGATCAAACTCAGCCTTTAGGAGATGAGAGTTTGGTTGAGTGGGCTCGACCACTTCTGATTCATGCCATTGAGACACATGACATTAGTGGATTAACAGATCCAAGGCTTGAAAAGCACTATGTGGAGAGTGAAATGTTCAGAATGATTGAGGCAGCCGCAGCATGTGTTCGCCACTCCGCTCCTAAACGGCCTCGAATGGTTCAGGTGGTAAGAGCCTTAGATAGTGGAGATGATATATTTGATCTAACAAATGGAGTAAAATATGGTCAGAGCACTATTTATGATTCAGGGCAGTATGATAAAGATATTATGCTATTCAGGAGAATAGCCAATGGTAGCTTTGTTGATTCTGATTCTGATATGTACAGTATAGAGTATGGTTATTCAAGAGAAGTTTCTGGAACTCAACATGCATGGATGCGAAGTGGTTCGAGTGGCGAATCAGAATCGAAAGCTTTCAACAGTCATCGAAGCAGCAGTGGATGA 2061 0.4377 MDLKKEKNDTTNDSSSSSSPITKFSTSKTSKNIPKKHFHPINNESPSPKDSPPTPNPDDKSVSPETAPLKPPPSPPPPPVLLKSPPPPPSLPPPPPSLPPLPSLPPPPSPPPPPLLPSPPPPLPAFPPPPPPPSQRVPPPRSQINNSSSPSPAQNKTPPPPLPPSRKDAPSNDSSTKSPFSPVPTPSGSKNQTTQGGGGGGGSHAKPGGSSSSSSQASSGGDNNPGKYVGYALAGVFVLGLVALALFFTYRRKRTKGDPFVATYIHAKSGTNMQYYAQQPQSPHGNNYGNGSMKHIGGSSLDTAQPKSAQIAFTYNMVMEMTKAFSSENVIGEGGFGCVYKGWLHEGRAVAVKQLKAGSGQGEREFQAEVEIISRVHHRHLVSLVGYCISEQQRMLIYEFVPNGTLHHHLHGSGMPVLDWAKRLKIAIGAAKGLAYLHEDCSQKIIHRDIKSANILLDNAFEAQVADFGLAKLADAGNTHVSTRVMGTFGYMAPEYATSGKLTDRSDVFSFGVVLLELVTGRKPVDQTQPLGDESLVEWARPLLIHAIETHDISGLTDPRLEKHYVESEMFRMIEAAAACVRHSAPKRPRMVQVVRALDSGDDIFDLTNGVKYGQSTIYDSGQYDKDIMLFRRIANGSFVDSDSDMYSIEYGYSREVSGTQHAWMRSGSSGESESKAFNSHRSSSG 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal15g1612 686 Gene3D Phosphorylase Kinase; domain 1 292 400 - -
Lal15g1612 686 MobiDBLite consensus disorder prediction 206 222 - -
Lal15g1612 686 MobiDBLite consensus disorder prediction 66 139 - -
Lal15g1612 686 MobiDBLite consensus disorder prediction 168 199 - -
Lal15g1612 686 CDD STKc_IRAK 331 599 - -
Lal15g1612 686 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK13-RELATED 48 668 - -
Lal15g1612 686 SUPERFAMILY Protein kinase-like (PK-like) 307 598 IPR011009 -
Lal15g1612 686 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 48 668 - -
Lal15g1612 686 SMART serkin_6 325 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g1612 686 PRINTS Proline rich extensin signature 46 62 - -
Lal15g1612 686 PRINTS Proline rich extensin signature 75 92 - -
Lal15g1612 686 PRINTS Proline rich extensin signature 96 121 - -
Lal15g1612 686 ProSitePatterns Serine/Threonine protein kinases active-site signature. 445 457 IPR008271 GO:0004672|GO:0006468
Lal15g1612 686 MobiDBLite consensus disorder prediction 1 222 - -
Lal15g1612 686 MobiDBLite consensus disorder prediction 153 167 - -
Lal15g1612 686 ProSitePatterns Protein kinases ATP-binding region signature. 331 353 IPR017441 GO:0005524
Lal15g1612 686 Gene3D Transferase(Phosphotransferase) domain 1 401 609 - -
Lal15g1612 686 MobiDBLite consensus disorder prediction 12 29 - -
Lal15g1612 686 ProSiteProfiles Protein kinase domain profile. 325 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal15g1612 686 MobiDBLite consensus disorder prediction 664 686 - -
Lal15g1612 686 Pfam Protein tyrosine and serine/threonine kinase 328 596 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal15g1612 Lal-Chr15 17957741 17961689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal15g1612 217 651 Trihelix Transcription Factor Family AT1G70460 63.077 0.0 573
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Lal15g1612 PK_Tyr_Ser-Thr 3.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal15g1612 - - lang:109330554 859.366