LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal15g1602	ATGGGGAAGAAGCAGAAACCATCTCTTCCTCCTCCTTCTGTTGATACTTCATCAGATGAATTCAATCTCACTCCTCTTCCCAAACATAACCCTCATTCTCATTCTGATGATGATGATGATGATGATGATGATTTAGATGATTCACAATCCTCTTCCCAAGAACAAGAACAAGAACAAGAAGATGAAGATGAAGATGAAGAACATCATAATCAACCACTTCCTCAAAACCCTACCCCCCTTTCTGTCAAATCCCCCACATCTTCCGATTCTGATACCGATTCTGGTTCTGATTCTGATTCCGACACTTCTCTTCTCAATTCCAAACCTAAACCCCTCGCATCCAAGCCAATCGATCAGACTCCTAAACCTAATTCAAATTCTGCTCACCCCGTGAAGGATAAACATGCATTGAAGCGCCCTGCCAAGGCCATCAATGTTTCGGTTAATGATCCTCCGAAACGGGCTAAGAAGAAGGGAATCGATGGCGACGGCGATGGCGACGAAGAGATGAAAGATGTGAAGAAGAGTGGTGGTGGAGGGGGAGAGTCTAATTCTAAGAAGTTATTTCAGAGGCTGTGGAGTGAGGAAGATGAGATTGCTATATTGAAAGGAATGGTTGAGTTCACTTCCAAGATTGGACAAGATCCTTATAGATATGCTGATGCTTTTTATGATTTCATGAAGAAATCGCTTCATGCTGAGGCTTCTGGTAACCAATTGAAGGAGAAGATAAGAAGGTTGAAACTCAAATTTGAGAAGAATGCAAAGAGAGGAAAAAATGGTGAAGATCCAAATTTTTCTAAATCATTCGACCGTGAAACATTTCAATTGTCGAAGAAGGTTTGGGGCAATGCAGCATCAGGAGAAAAAGCGAAGCCTGATGGGAAGGTTGGCAAGAGTCCAAAGAAGGGAGTTAAAAGTACTAGTGTTGTTGCACTGAAACCTGAATCGAAATTGGAGGCGAGATCAGTTGATTCAAACAAAGATGTCAATAGTGACAATGTTGAATTGACTGATGCAAGTGAAACCGATATGACTTCATATCTATTGGAAGTGATTCGGGTTAACAAGGGTGTTGGGTTGAATGGGCTGAGTGAGGATGTGGTAAAGAGAGGAATGGAGTTAATTGGAGCGTCGGAAAGGAAAGAATTGGAAGGGCAGTGGAAGGAATTGCAAGATGCTGAATTGGAGCTTTCTGTGAAGCGTGTAGAATTAATTGCTAACCATGCTAGGCTGACATTGGAGGCTCTCAGGTCATCAAACCAGCATTAG	1272	0.423	MGKKQKPSLPPPSVDTSSDEFNLTPLPKHNPHSHSDDDDDDDDDLDDSQSSSQEQEQEQEDEDEDEEHHNQPLPQNPTPLSVKSPTSSDSDTDSGSDSDSDTSLLNSKPKPLASKPIDQTPKPNSNSAHPVKDKHALKRPAKAINVSVNDPPKRAKKKGIDGDGDGDEEMKDVKKSGGGGGESNSKKLFQRLWSEEDEIAILKGMVEFTSKIGQDPYRYADAFYDFMKKSLHAEASGNQLKEKIRRLKLKFEKNAKRGKNGEDPNFSKSFDRETFQLSKKVWGNAASGEKAKPDGKVGKSPKKGVKSTSVVALKPESKLEARSVDSNKDVNSDNVELTDASETDMTSYLLEVIRVNKGVGLNGLSEDVVKRGMELIGASERKELEGQWKELQDAELELSVKRVELIANHARLTLEALRSSNQH	423

Showing 1 to 1 of 1 entries

Previous1Next

Annotation information

Show entries

Search:

Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Lal15g1602	423	MobiDBLite	consensus disorder prediction	151	176	-	-
Lal15g1602	423	MobiDBLite	consensus disorder prediction	72	109	-	-
Lal15g1602	423	PANTHER	STOREKEEPER PROTEIN-LIKE	4	421	-	-
Lal15g1602	423	MobiDBLite	consensus disorder prediction	37	67	-	-
Lal15g1602	423	MobiDBLite	consensus disorder prediction	1	186	-	-
Lal15g1602	423	Pfam	Protein of unknown function, DUF573	189	283	IPR007592	GO:0006355
Lal15g1602	423	MobiDBLite	consensus disorder prediction	251	310	-	-
Lal15g1602	423	MobiDBLite	consensus disorder prediction	251	275	-	-
Lal15g1602	423	PANTHER	BNAANNG10740D PROTEIN-RELATED	4	421	IPR007592	GO:0006355
Lal15g1602	423	MobiDBLite	consensus disorder prediction	10	24	-	-

Showing 1 to 10 of 10 entries

Previous1Next

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal15g1602	Lal-Chr15	17875089	17876360	Dispersed/Wgd

Showing 1 to 1 of 1 entries

Previous1Next

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lal15g1602	84	416	GeBP Transcription Factor Family	AT1G61730	32.464	4.65e-32	123

Showing 1 to 1 of 1 entries

Previous1Next

Transcription factors information

Show entries

Search:

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	GeBP	Lal15g1602		DUF573	7.6e-33	CL0123

Showing 1 to 1 of 1 entries

Previous1Next

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal15g1602	-		-	lang:109332627	531.176

Showing 1 to 1 of 1 entries

Previous1Next